Pairwise Alignments

Query, 302 a.a., TonB domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 269 a.a., energy transducer TonB from Pseudomonas fluorescens FW300-N2C3

 Score = 49.3 bits (116), Expect = 1e-10
 Identities = 60/248 (24%), Positives = 86/248 (34%), Gaps = 59/248 (23%)

Query: 54  PGMPVSKPARAAQATQP-PPAARPPAAQTPTTRPRPDEATAVSPRKRRVEAKPRPKKETP 112
           P +P   P    + +QP PP   PP    P   P P       P    + AKP PKK   
Sbjct: 79  PIVPPEIPPMTIEFSQPAPPVVEPPPPVPPP--PPPPVVEPPPPVVDELAAKPAPKKIPK 136

Query: 113 RREVAQRAPVPRAEEKRTVDTQPTQTTSTTTAPESSHEGDSAVANTAHAGVPGTGTTPGS 172
            + V +  P P A   + V+  P   T     P       + VA  A A V     TP S
Sbjct: 137 PKPVPKPVPKPVA---KPVEPPPAPPTPAPPVP-------APVAAPAPAPV-----TPAS 181

Query: 173 GGPEKGMAYGTGGGTGGGSTAHAGTGGEGLGGTGAGTGGYDRGPRAVYTPRPPYPREALH 232
                  AY                                     +  P P YP  A  
Sbjct: 182 ANA----AY-------------------------------------LKNPAPEYPSLAQR 200

Query: 233 KGAEGVVMVRLLLDPSGRVVQSRIAGGDMADIFAETTLETVERWRFKPCGRQGRNVSCEV 292
           +G EG V++R+ +  SG+  + +I          +  L  V+RW F P  +     +  V
Sbjct: 201 RGWEGTVLLRVQVLASGKPGEIQIQKSSGRQQLDDAALAAVKRWSFVPAKQGDVAQNGWV 260

Query: 293 EIPVEFRI 300
            +P++F+I
Sbjct: 261 SVPIDFKI 268



 Score = 33.5 bits (75), Expect = 6e-06
 Identities = 22/87 (25%), Positives = 27/87 (31%), Gaps = 10/87 (11%)

Query: 47  MELSLGGPGMPVSKPARAAQATQPPPAARPPA----------AQTPTTRPRPDEATAVSP 96
           M +    P  PV +P        PPP   PP           A     +P+P       P
Sbjct: 88  MTIEFSQPAPPVVEPPPPVPPPPPPPVVEPPPPVVDELAAKPAPKKIPKPKPVPKPVPKP 147

Query: 97  RKRRVEAKPRPKKETPRREVAQRAPVP 123
             + VE  P P    P       AP P
Sbjct: 148 VAKPVEPPPAPPTPAPPVPAPVAAPAP 174