Pairwise Alignments

Query, 905 a.a., copper-translocating P-type ATPase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 738 a.a., cation-transporting ATPase pacS (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  489 bits (1259), Expect = e-142
 Identities = 315/809 (38%), Positives = 455/809 (56%), Gaps = 88/809 (10%)

Query: 90  FAVSGMTCAVCAGRIEKVVGTMDGVGAVSVNLAAETAQVTPLPG-VDAGSLAASVVERIS 148
           F V  M CA CA  +EK V  + GV   SVN A+ T  ++     +  G + A+V+    
Sbjct: 9   FPVLNMHCAGCANNVEKTVKKLPGVVDASVNFASNTLTISYEDDKLTPGEIRAAVL---- 64

Query: 149 GLGFGATLQEQAADAASSASLWERQRHDADARLARMKARLVPEFGFTVPLLLLSMGHMMG 208
             G+   ++E        A+  ER+  +   R  R+K +++  + F VPLL+ SM  M  
Sbjct: 65  AAGYDLIVEE--------ANKEERREEEQHKRYLRLKRKVIGAWIFVVPLLIFSMLLM-- 114

Query: 209 LPLPGFLHPAHSPLTFAVAQLLLTLPVM-WSGRDFYRIGFGNLRRLSPNMDSLVALGTGA 267
                     H P +  + Q+LL +PVM   G  F+   +   +    NMD+LVAL T  
Sbjct: 115 ----------HMPYSNEI-QMLLAIPVMVLFGGSFFTGAWKQAKIGRSNMDTLVALSTSI 163

Query: 268 AFIYSLWNTVEIALGVDVAHRVMDLYYESAAVLITLVSLGKYFEMRSRARTSEAIKSLMD 327
           AF++SL+NT       D       +YYE++AV+I  V  GK  E R++  TS+AI+ LM 
Sbjct: 164 AFLFSLFNTFFPQFWTDRGLEP-HVYYEASAVIIAFVLTGKMMEERAKGNTSDAIRKLMG 222

Query: 328 LAPETALRLVSADGGPAVGHEAGDGTNVAVQEVPVAEVRAGDLLQVRPGARIPVDGTVVS 387
           + P+ A  L    GG               +E+ +  ++ GD++ VRPG +IPVDG +  
Sbjct: 223 MQPKVARVL---RGG-------------VEEEIQIDLLQVGDMVVVRPGEQIPVDGQLSE 266

Query: 388 GTSSVDESMLTGESLPVSKTGGDSVAGGTINRLGTFVMRAERVGADTVLARIIRLVEEAQ 447
           G S VDESM++GE +PV K  GD V  GTIN+ G+F++RA +VG+DTVLARII +V+EAQ
Sbjct: 267 GDSYVDESMISGEPIPVEKKKGDKVLAGTINQRGSFIIRASQVGSDTVLARIIHMVQEAQ 326

Query: 448 GSKAPIANIADRVSLYFVPTVMALAVLAGVGWYTVGDADF-TFALRIFVAVMVIACPCAM 506
           GSKAP+  I DR++  FVP V+ +A+L  V W  +G +++ ++ +   V+V+VIACPCA+
Sbjct: 327 GSKAPVQRIVDRITGIFVPVVLGIAILTFVLWVAIGGSEYISYGILSAVSVLVIACPCAL 386

Query: 507 GLATPTSIMVGTGRGAQLGILVKSGAALETAGRVDTVVFDKTGTLTEGKPRLVHVSAVED 566
           GLATPT++MVG G+ A   IL+K   ALE   +VD VV DKTGTLTEG P          
Sbjct: 387 GLATPTALMVGIGKAAGQHILIKDAVALEQMRKVDVVVLDKTGTLTEGHPT--------- 437

Query: 567 GPWQTDVSASGGDGTQGGASGMRLTQPLAPDVAEDTPRRMVLRLAASLEAVSEHPLAEAI 626
                             A+G    QP      +       + LAA L+  SEHPLA AI
Sbjct: 438 ------------------ATGWLWAQPQEEHFKD-------VLLAAELK--SEHPLAGAI 470

Query: 627 LAGAA-EAGIAPWPVEAFEAVPGRGVRGRVRTDAGESGVLLGNHAFMAEAGVAGLDAHGL 685
           +A    E  I P P+ +FE++ G+G++   +         +G+H  + +      D   +
Sbjct: 471 VAVLQDEEKITPAPLSSFESITGKGIKVSYQGKT----YWVGSHKLLKDFSATVSDV--M 524

Query: 686 REMLDALADAGVTPLLLAAAGEMRGIVGVADPLRAEARGVLERLRQCGVRAVMLTGDNRR 745
            +ML      G   +      E+  I+ V+DP++A +   ++ L++ G+   MLTGD +R
Sbjct: 525 ADMLVHYESDGNGIIYFGRENELLAIIAVSDPIKATSAEAVKELKRQGIDICMLTGDGQR 584

Query: 746 TAEAIARQAGMDEVVAEVMPDAKEREVSRLQGEGRVVAMVGDGINDAPALARADVGIAMG 805
           TA A++ + G++  VA+ +PD K   V  LQ +G+ VAMVGDGIND+ ALA ADV IAMG
Sbjct: 585 TALAVSSRLGIERFVADALPDDKAEFVRELQMQGKKVAMVGDGINDSQALALADVSIAMG 644

Query: 806 TGIDVAVEAGDIVLLRGGLTSVPVAMQLSRATMRNIRQNLFWAFGYNVLGIPVAAGLLYA 865
            G D+A++   + L+   L  +P A +LSR T+R I QNLFWAF YN++GIP+AAG+L+ 
Sbjct: 645 KGTDIAMDVAMVTLMTSDLLLLPKAFELSRQTVRLIHQNLFWAFIYNLIGIPIAAGVLFP 704

Query: 866 FGGPTLSPMLAGAAMALSSVSVVGNALRL 894
             G  L+PMLA AAMA SSVSVV N+L L
Sbjct: 705 INGLLLNPMLASAAMAFSSVSVVLNSLSL 733



 Score = 41.6 bits (96), Expect = 2e-07
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 11 RSRMPVRGMTCAVCAGRIEKMVGRMEGVETVAVNLATEVMDVTW-DDRTDLDAIVRQVSA 69
          +   PV  M CA CA  +EK V ++ GV   +VN A+  + +++ DD+     I   V A
Sbjct: 6  KKAFPVLNMHCAGCANNVEKTVKKLPGVVDASVNFASNTLTISYEDDKLTPGEIRAAVLA 65

Query: 70 LGFEAMPPDA 79
           G++ +  +A
Sbjct: 66 AGYDLIVEEA 75