Pairwise Alignments

Query, 204 a.a., ribosomal RNA large subunit methyltransferase J (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 210 a.a., Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) from Xanthomonas campestris pv. campestris strain 8004

 Score =  118 bits (295), Expect = 9e-32
 Identities = 69/194 (35%), Positives = 110/194 (56%), Gaps = 5/194 (2%)

Query: 4   YRDHYFLKAKQENYPARSVYKLKEIDNRFKIFRQGMKVLDLGAAPGSWSLGAAEKVGPRG 63
           + D +  KA+ E   +R+ YKL+E+  R ++ + GM V+DLGAAPG WS    + +G  G
Sbjct: 16  FADPFVKKAQAEGMRSRAAYKLEELLQRDRLLKPGMVVVDLGAAPGGWSQQVRKSMGASG 75

Query: 64  RVLACDLQETDTVFPDNVTFMQENVFERS--EAFENLLDEIAPFDVVISDMAPRTTGTRF 121
           RV+A D+ E   +    V F+  +  E++    FE +L ++ P D+V+SDMAP  +G   
Sbjct: 76  RVVALDILEMPPLA--GVEFLHGDFREQAVLSEFEAMLGDV-PVDLVLSDMAPNKSGMDA 132

Query: 122 TDQARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAMRQRFSAVKSFKPKSSR 181
            DQ R + L   A+  AD  L  GG+F++K+F G    + ++ +R+R+  V   KP +SR
Sbjct: 133 VDQPRMMHLAELAMEFADTHLKVGGAFLIKLFQGVGSDDYIRELRRRYEKVTIRKPAASR 192

Query: 182 AESKETFYVCLGYR 195
             S E + +  G R
Sbjct: 193 KRSAEVYVLGQGKR 206