Pairwise Alignments

Query, 204 a.a., ribosomal RNA large subunit methyltransferase J (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 216 a.a., 23S rRNA Um-2552 2'-O-methyltransferase from Pseudomonas syringae pv. syringae B728a

 Score =  136 bits (343), Expect = 2e-37
 Identities = 77/197 (39%), Positives = 117/197 (59%), Gaps = 5/197 (2%)

Query: 4   YRDHYFLKAKQENYPARSVYKLKEIDNRFKIFRQGMKVLDLGAAPGSWSLGAAEKVGPRG 63
           + D Y   A+++ Y +R+ YKL EI  + K+ R GM V+DLGAAPG WS   +  +G +G
Sbjct: 15  FDDKYVKMAQKDGYRSRASYKLLEIQEKDKLIRPGMTVIDLGAAPGGWSQVTSRLIGGQG 74

Query: 64  RVLACDLQETDTVFPDNVTFMQENVFERSEAFENLLDEIA--PFDVVISDMAPRTTGTRF 121
           R++A D+ E D++ PD VTF+Q + F      E +L+ +     D+VISDMAP  +G   
Sbjct: 75  RLIASDILEMDSI-PD-VTFIQGD-FTEDAILEQILEAVGNTQVDLVISDMAPNMSGLSA 131

Query: 122 TDQARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAMRQRFSAVKSFKPKSSR 181
            D  R++ LC  AL +A R L  GG F++K+F G       + +R+ F  V+  KP SSR
Sbjct: 132 VDMPRAMFLCELALDLAGRVLRPGGDFLIKVFQGEGFDVYHKDIRKLFDKVQMRKPSSSR 191

Query: 182 AESKETFYVCLGYRGVE 198
             S+E + +  G+RG++
Sbjct: 192 DRSREQYLLARGFRGID 208