Pairwise Alignments

Query, 204 a.a., ribosomal RNA large subunit methyltransferase J (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 210 a.a., 23S rRNA methylase from Dechlorosoma suillum PS

 Score =  127 bits (320), Expect = 1e-34
 Identities = 78/185 (42%), Positives = 107/185 (57%), Gaps = 5/185 (2%)

Query: 6   DHYFLKAKQENYPARSVYKLKEIDNRFKIFRQGMKVLDLGAAPGSWSLGAAEKVGPRGRV 65
           DH+  +AK E + +R+ +KL EID++ K+ + G  V+DLGAAPG W   A ++VG  G+V
Sbjct: 17  DHFVHRAKAEGWRSRASFKLLEIDDKDKLLKPGEVVVDLGAAPGGWCQVAVQRVGEGGKV 76

Query: 66  LACDLQETDTVFPDNVTFMQENVFERS--EAFENLLDEIAPFDVVISDMAPRTTGTRFTD 123
            A DL E   +    V FMQ +  E S    FE+ L       +V+SDMAP  +G   +D
Sbjct: 77  FAIDLLEMQGIA--GVDFMQGDFREESVLREFESRLAG-RQVGLVLSDMAPNISGVNVSD 133

Query: 124 QARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAMRQRFSAVKSFKPKSSRAE 183
           QARS+ LC  AL  A   L   G+F+VK+F G    E + AMR+ F  V + KPKSSR  
Sbjct: 134 QARSIYLCELALEFAREHLKPDGAFLVKVFQGSGFNEFLAAMRETFEVVATRKPKSSRDR 193

Query: 184 SKETF 188
           S E +
Sbjct: 194 SPELY 198