Pairwise Alignments

Query, 204 a.a., ribosomal RNA large subunit methyltransferase J (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 216 a.a., 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE from Dyella japonica UNC79MFTsu3.2

 Score =  124 bits (310), Expect = 2e-33
 Identities = 72/192 (37%), Positives = 112/192 (58%), Gaps = 5/192 (2%)

Query: 4   YRDHYFLKAKQENYPARSVYKLKEIDNRFKIFRQGMKVLDLGAAPGSWSLGAAEKVGPRG 63
           + D Y  KA+ E   +R+VYKL+E+  R ++ + GM+V+DLGAAPG WS    +++G  G
Sbjct: 15  FDDVYVKKAQAEGVRSRAVYKLEELIERDRLLKPGMRVVDLGAAPGGWSQLVRQRLGDTG 74

Query: 64  RVLACDLQETDTVFPDNVTFMQENVFERS--EAFENLLDEIAPFDVVISDMAPRTTGTRF 121
           +V+A D+     +    V F+Q +  E S     E+ L E    D+V+SDMAP  +G   
Sbjct: 75  KVVALDILPMQGIA--GVDFLQGDFREESVLRELESRL-EGQQLDLVLSDMAPNMSGVAL 131

Query: 122 TDQARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAMRQRFSAVKSFKPKSSR 181
            DQ R+++L   AL  +   L  GGSF++K+F G    + ++++R  FS V   KPK+SR
Sbjct: 132 ADQIRAMDLAELALDFSRHWLKPGGSFLIKLFQGAGFDDYLRSLRAEFSRVTMRKPKASR 191

Query: 182 AESKETFYVCLG 193
           A S+E + +  G
Sbjct: 192 ARSREVYALATG 203