Pairwise Alignments

Query, 204 a.a., ribosomal RNA large subunit methyltransferase J (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 221 a.a., RlmE family RNA methyltransferase from Ralstonia sp. UNC404CL21Col

 Score =  105 bits (262), Expect = 6e-28
 Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 18/198 (9%)

Query: 6   DHYFLKAKQENYPARSVYKLKEIDNRFKIFRQGMKVLDLGAAPGSWSLGAAEKV--GPR- 62
           D Y   A++E Y AR+ YKLKEID + K+ + G  ++DLGAAPGSWS     K+   PR 
Sbjct: 17  DPYVKLAQREGYRARAAYKLKEIDEQDKLIKPGQVIVDLGAAPGSWSQYVRNKLAASPRA 76

Query: 63  ------GRVLACDLQETDTVFPDNVTFMQENVFERSEAFENLLDEI------APFDVVIS 110
                 G ++A D+   + +   +VTF+Q + F   + F  L + +         D+V+S
Sbjct: 77  KDGRIDGAIVAIDILPMEAI--ADVTFIQGD-FREDDVFRQLEEIVLEATGGGKVDLVLS 133

Query: 111 DMAPRTTGTRFTDQARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAMRQRFS 170
           DMAP  +G    D AR   +   A+  A   L   G+ ++K F G    ++V+  ++ F 
Sbjct: 134 DMAPNLSGVASADAARMEHIAELAVEFAMAHLKPEGALLIKCFHGSGYSQIVEMFKRHFK 193

Query: 171 AVKSFKPKSSRAESKETF 188
            V   KPK+SR +S ETF
Sbjct: 194 IVAPRKPKASRDKSSETF 211