Pairwise Alignments

Query, 204 a.a., ribosomal RNA large subunit methyltransferase J (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 220 a.a., ribosomal RNA large subunit methyltransferase E from Burkholderia phytofirmans PsJN

 Score =  111 bits (278), Expect = 9e-30
 Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 19/198 (9%)

Query: 6   DHYFLKAKQENYPARSVYKLKEIDNRFKIFRQGMKVLDLGAAPGSWSLGAAEKV------ 59
           D Y   A++E Y AR+ YKLKEID + ++ R G  ++DLG+ PGSWS  A  K+      
Sbjct: 17  DPYVKMAQREGYRARAAYKLKEIDEQDRLIRPGQVIVDLGSVPGSWSQYARNKLAKGAQR 76

Query: 60  ------GPRGRVLACDLQETDTVFPDNVTFMQENVFERSEAFENLLDEIA---PFDVVIS 110
                 G  G ++A D+   + +   +VTF+Q +   R +     L+E+      D+VIS
Sbjct: 77  DAEREGGIDGTIIALDILPMEPIA--DVTFIQGDF--REDTVLGQLEELVGERQVDLVIS 132

Query: 111 DMAPRTTGTRFTDQARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAMRQRFS 170
           DMAP  +G    D AR   LC  AL  +   L + G+ +VK F G    ++V+  + +F 
Sbjct: 133 DMAPNLSGVAVADAARIEHLCDLALEFSQNHLKQDGALLVKCFHGSGYSQIVEKFKHQFK 192

Query: 171 AVKSFKPKSSRAESKETF 188
            V + KPK+SR +S ETF
Sbjct: 193 VVAARKPKASRDKSSETF 210