Pairwise Alignments

Query, 186 a.a., DNA-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 201 a.a., Helix-turn-helix motif protein from Pseudomonas syringae pv. syringae B728a

 Score = 56.2 bits (134), Expect = 4e-13
 Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 5/146 (3%)

Query: 28  DLAAKVGVTAADVLRYESGEVEIPVSYLTDVARECRVDLTALISGGDAHLQDFTIVRKGQ 87
           D+A   G++   + + E+ +V   +  L+ +     + ++ L S  D       +V+  +
Sbjct: 34  DVARIAGISQGMLSKIENAQVSTSLDNLSRLCDVLGMPMSKLFSQYDQQGSSALLVKADE 93

Query: 88  GLSVQRR---KDYDYWNLA-SRFTNRRMEPFIVRVPAKDESELNFNYHRGQEFIYILEGR 143
           GL V RR   K + Y  L  +R   +  E ++V +    E    F+ H G EF+++LEG 
Sbjct: 94  GLEVVRRGTEKGHTYHLLNHTRGPKKSFEAYMVTMDDASEEFPTFS-HPGTEFLHLLEGE 152

Query: 144 MEVRLGDKVHVLEPGDSMYFSSRIPH 169
           +  R G++++ ++ GDS+ F   IPH
Sbjct: 153 LIYRHGNQLYPMQAGDSLTFDGDIPH 178