Pairwise Alignments

Query, 186 a.a., DNA-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 191 a.a., transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 85.1 bits (209), Expect = 7e-22
 Identities = 54/186 (29%), Positives = 95/186 (51%), Gaps = 12/186 (6%)

Query: 9   KEIAPRLAGLRDAVGFSPDDLAAKVGVTAADVLRYESGEVEIP-VSYLTDVARECRVDLT 67
           K +  ++  LR+    S ++LA + G+    + R E+  ++IP ++ L  +AR   V L 
Sbjct: 5   KIVGEKIKALREDKSISIEELAQRSGLAIEQIERIENN-IDIPSLAPLIKIARVLGVRLG 63

Query: 68  ALISGGDAHLQDFTIVRKGQGL--------SVQRRKDYDYWNLASRFTNRRMEPFIVRVP 119
             +   D       + RK +          ++  RK  +Y +L+    +R MEPFI+ V 
Sbjct: 64  TFLDDQDEIGP--VVCRKKEAKDAISFSNNAIHSRKHMEYHSLSKSKADRHMEPFIIDVM 121

Query: 120 AKDESELNFNYHRGQEFIYILEGRMEVRLGDKVHVLEPGDSMYFSSRIPHALRGLDGADA 179
             ++S+   + H G+EFI ++EG ME+  G   ++LE GDS+Y+ S +PH +   +G  A
Sbjct: 122 PTEDSDFVLSSHEGEEFIMVMEGVMEISYGKNTYLLEEGDSIYYDSIVPHHVHAYEGQAA 181

Query: 180 VFLDVI 185
             L V+
Sbjct: 182 KILAVV 187