Pairwise Alignments

Query, 723 a.a., S1 RNA binding domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 778 a.a., Tex family protein from Rhodopseudomonas palustris CGA009

 Score =  621 bits (1601), Expect = 0.0
 Identities = 345/725 (47%), Positives = 458/725 (63%), Gaps = 22/725 (3%)

Query: 9   SVAHRLAADLGITTAQASAALKLFDEGGTIPFVARYRKEATGGLDEVALTALRDGCERLR 68
           ++A  +A++L +   Q  AA+ L D G T+PF+ARYRKEATG LD+  L  L +    LR
Sbjct: 3   NIASVIASELAVREQQVQAAIDLLDGGSTVPFIARYRKEATGMLDDTQLRTLEERLRYLR 62

Query: 69  TLDKRRDAIIASMTEREQLTPDLAKALHAATTLTALEDIYLPFRPKRVTRAAKARERGLA 128
            ++ RR AII S+ ++ ++TP+L  AL  A +   LEDIYLPF+ KR T+A  ARE GL 
Sbjct: 63  EMEARRTAIIDSIKQQGKMTPELEAALLKADSKARLEDIYLPFKEKRRTKAQIAREAGLE 122

Query: 129 PLAERLLEQRGAQAGQLAAPFVDEAKG---VPDTAAALAGARDIIAETVSEDRATRATLR 185
           PLA+ LL+         AA +V +A+G   V D  AAL GAR I+ E  SE      +LR
Sbjct: 123 PLADLLLQNPDRDPQAEAAAYV-KAEGEHPVADVKAALEGARAILVERFSEHADLTGSLR 181

Query: 186 DIFVRRATLRSKVARGKEEQAATYRDHFDRSEHAAAAPAHRLLAMFRGEREELLDVRVRP 245
           +    R  L++ V  GK+   A + D+FD SE     P+HR+LA+ RGE+EE+L +    
Sbjct: 182 EAMWSRGALKAGVRDGKQAAGAKFADYFDFSEPYEKLPSHRILALLRGEKEEVLSLDFGD 241

Query: 246 DDDIA----------VGALHRRWLKGRASSAGTDAAEVATALTDAWNRLLAPSLENEFRT 295
            +D            + A      KGR +        ++  +  AW   +  +L  + R 
Sbjct: 242 GEDPESKEPTQYENRIAATFGIARKGRPADGF-----LSDCVRWAWRTRIKTALALDMRM 296

Query: 296 ALRERAEAEAIAVFAANLRELLLAPPMGPRRTLALDPGWRTGAKLVCLDAQGALLHHEVI 355
            L ++AE EA+ VFAANLR+LLLA P G R TL LDPG+RTG K+  +D  G ++ H  I
Sbjct: 297 RLWQQAETEAVRVFAANLRDLLLAAPAGGRATLGLDPGFRTGVKVAVIDRTGKMVDHATI 356

Query: 356 HPLTGGDRATRAAATLRELCTRHGIEAVAVGNGTAGRETEAFVKS---AGLPPHVTVALV 412
           +P     +   +  TL +LC +H IE VA+GNGTA RETE  V     A     +T A+V
Sbjct: 357 YPHEPARKWNESMLTLAQLCVKHRIELVAIGNGTASRETEKLVTDLMKAKPDLKLTKAIV 416

Query: 413 DERGASVYSASEVARAEFPDHDVTVRGAISIGRRLMDPLAELVKVDPRSLGVGQYQHDVD 472
            E GASVYSASE A  EFPD DV++RGA+SI RRL DPL ELVKV P+S+GVGQYQHD++
Sbjct: 417 SEAGASVYSASEFASKEFPDLDVSIRGAVSIARRLQDPLGELVKVPPQSIGVGQYQHDLN 476

Query: 473 QNALRRALEEVVASCVNAVGVDVNTASPELLAYVSGIGPALAKGIVALRAVNGPFRTRRD 532
           Q+AL RAL+  V  CVNAVGVD+NTAS  LLA VSGIG  LA  IVA R  NGPF +R  
Sbjct: 477 QHALARALDATVEDCVNAVGVDLNTASAPLLARVSGIGETLATNIVAHRDANGPFPSRDK 536

Query: 533 LLKVPRLGPKAFEQAAGFLRVHGGPEPLDASAVHPESYAVVRRMAEDTGCSVPDLMRDAT 592
           L +VPRLGPKAFEQ AGFLR+  G  PLDAS VHPESY +V+++   T   +  L+    
Sbjct: 537 LKEVPRLGPKAFEQCAGFLRIRDGENPLDASGVHPESYPIVKKILAATKSDIKALIGQTK 596

Query: 593 RREALRLERYVDDRVGLPTLRDIMSELARPGRDPRPAFEVFAFAEGVNKVDDVQPGMELP 652
             + L+ + + D++ G+PT+ DI+ EL +PGRDPRP F+   F EGV K+ D++PGM L 
Sbjct: 597 MLQGLKPQAFADEKFGIPTVSDILKELEKPGRDPRPEFKTATFQEGVEKITDLKPGMILE 656

Query: 653 GIVTNVTKFGAFVDIGVHRDGLVHVSQLADRFVRDPAEVVAPGRKVRVRVLDVDRQRERI 712
             +TNV  FGAF DIGVH+DGL+H+S +++R + DP EVV PG+ V+V+VL+VD  R RI
Sbjct: 657 ATITNVAAFGAFADIGVHQDGLIHISAMSERRINDPREVVKPGQVVKVKVLEVDVPRNRI 716

Query: 713 NLTLK 717
            LTL+
Sbjct: 717 GLTLR 721