Pairwise Alignments

Query, 723 a.a., S1 RNA binding domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 779 a.a., Tex family protein from Dyella japonica UNC79MFTsu3.2

 Score =  624 bits (1609), Expect = 0.0
 Identities = 351/722 (48%), Positives = 462/722 (63%), Gaps = 19/722 (2%)

Query: 9   SVAHRLAADLGITTAQASAALKLFDEGGTIPFVARYRKEATGGLDEVALTALRDGCERLR 68
           S+ HR+A D+     Q  AA+ L D G T+PF+ARYRKEATGGLD+  L  L +    LR
Sbjct: 3   SIEHRIAQDIAAKPDQVIAAVDLLDGGATVPFIARYRKEATGGLDDTQLRLLEERLRYLR 62

Query: 69  TLDKRRDAIIASMTEREQLTPDLAKALHAATTLTALEDIYLPFRPKRVTRAAKARERGLA 128
            L++RR AI+AS+ E+ +LT  L + +  A T   LED+YLP++PKR T+A  ARE GL 
Sbjct: 63  ELEERRGAILASVEEQGKLTDALKRDILDADTKARLEDLYLPYKPKRRTKAQIAREAGLE 122

Query: 129 PLAERLLEQRGAQAGQLAAPFVDEAKGVPDTAAALAGARDIIAETVSEDRATRATLRDIF 188
           PLA  L E         AA FVD  KGV D  AAL GAR I+ ET++ED      LRD  
Sbjct: 123 PLALGLREDPTQAPELFAAQFVDAEKGVADVRAALDGARAILMETIAEDAHLVGELRDWL 182

Query: 189 VRRATLRSKVARGKEEQAATYRDHFDRSEHAAAAPAHRLLAMFRGEREELLDVRVRPDDD 248
             +  +R+KV  GKE + A +RD+FD  E     P+HRLLA+ R   E ++++ + P  D
Sbjct: 183 WDKGQIRAKVVAGKENEGAKFRDYFDHMESIGKIPSHRLLALMRARNEGVIELELAPTLD 242

Query: 249 IAVGALHRRWLKGR-ASSAGT-DAAEVATA-----LTDAWNRLLAPSLENEFRTALRERA 301
              G L     +GR A+ AG  D    A A     +   W   L   L  +    +RE A
Sbjct: 243 AEQGHLEG---EGRVAAHAGIHDRGRAADAWLRETVRLTWRVKLHLHLTLDLFGRVRESA 299

Query: 302 EAEAIAVFAANLRELLLAPPMGPRRTLALDPGWRTGAKLVCLDAQGALLHHEVIHPLTGG 361
           E EAI VF  NL++L+LA P G R  + LDPG RTG K+  +DA G +L  + ++P    
Sbjct: 300 EDEAIRVFGDNLKDLMLAAPAGARTVMGLDPGIRTGVKVAVVDATGKVLATDTVYPHEPR 359

Query: 362 DRATRAAATLRELCTRHGIEAVAVGNGTAGRETEAFVKSAG--LPPHVTVAL----VDER 415
           ++  ++ A L  LC +HG+  +A+GNGTA RET+   K AG  +  H  + L    V E 
Sbjct: 360 NQWDQSIARLAVLCKQHGVNLIAIGNGTASRETD---KLAGELIKKHADLKLSKIVVSEA 416

Query: 416 GASVYSASEVARAEFPDHDVTVRGAISIGRRLMDPLAELVKVDPRSLGVGQYQHDVDQNA 475
           GASVYSASEVA  EFP+ DV++RGA+SI RRL DPLAELVK++P+++GVGQYQHDV+Q  
Sbjct: 417 GASVYSASEVAAKEFPEMDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQVK 476

Query: 476 LRRALEEVVASCVNAVGVDVNTASPELLAYVSGIGPALAKGIVALRAVNGPFRTRRDLLK 535
           L RAL+  V  CVNAVGVDVNTAS  LL+ V+G+  ++A+ +V  R  NGPF  R  LLK
Sbjct: 477 LARALDAKVEDCVNAVGVDVNTASAALLSRVAGLSASVAENVVKHRDANGPFANRMALLK 536

Query: 536 VPRLGPKAFEQAAGFLRVHGGPEPLDASAVHPESYAVVRRMAEDTGCSVPDLMRDATRRE 595
           VPRLG KAFEQ AGFLR+  G  PLDAS+VHPE+Y VV R+    G  V  ++ D++   
Sbjct: 537 VPRLGDKAFEQCAGFLRIPNGDNPLDASSVHPEAYPVVERIIAQCGREVKSIVGDSSFLR 596

Query: 596 ALRLERYVDDRVGLPTLRDIMSELARPGRDPRPAFEVFAFAEGVNKVDDVQPGMELPGIV 655
            L+ E+Y D+R G+PT+RDI+ EL +PGRDPRP F   +FAEGV  + D++PGM L G V
Sbjct: 597 GLKAEQYTDERFGVPTVRDILKELEKPGRDPRPEFVAPSFAEGVEDLKDLRPGMILEGRV 656

Query: 656 TNVTKFGAFVDIGVHRDGLVHVSQLADRFVRDPAEVVAPGRKVRVRVLDVDRQRERINLT 715
           TNV  FGAFVDIGVH+DGLVHVS L+  FV+DP + V  G  V+V+V++VD  R+RI L+
Sbjct: 657 TNVAAFGAFVDIGVHQDGLVHVSALSHTFVKDPRDAVKAGDIVKVKVMEVDLPRQRIGLS 716

Query: 716 LK 717
           ++
Sbjct: 717 MR 718