Pairwise Alignments

Query, 723 a.a., S1 RNA binding domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 777 a.a., Tex family protein from Ralstonia sp. UNC404CL21Col

 Score =  605 bits (1560), Expect = e-177
 Identities = 344/733 (46%), Positives = 456/733 (62%), Gaps = 20/733 (2%)

Query: 1   MTETIPHDSVAHRLAADLGITTAQASAALKLFDEGGTIPFVARYRKEATGGLDEVALTAL 60
           MT+++    V+ R+A +L +   Q +AA++L DEG T+PF+ARYRKE T  LD+  L  L
Sbjct: 1   MTDSVLQKIVS-RIATELAVRPQQVAAAVQLLDEGATVPFIARYRKEVTDNLDDTQLRNL 59

Query: 61  RDGCERLRTLDKRRDAIIASMTEREQLTPDLAKALHAATTLTALEDIYLPFRPKRVTRAA 120
            +    LR L+ RR AI+AS+ E+ +LT  L  A+ AA T   LED+YLP++PKR TRA 
Sbjct: 60  EERLLYLRELEDRRAAILASIEEQGKLTDVLRTAIEAAETKQVLEDLYLPYKPKRRTRAQ 119

Query: 121 KARERGLAPLAERLLEQRGAQAGQLAAPFVDEAK----GVPDTAAALAGARDIIAETVSE 176
            ARE GL PLA+ LL          AA FV+       GVPD  AAL GARDI++E   E
Sbjct: 120 IARECGLEPLAQALLADPTLDPQTEAAKFVNGNPTADGGVPDVKAALDGARDILSEQFGE 179

Query: 177 DRATRATLRDIFVRRATLRSKVARGKEE-QAATYRDHFDRSEHAAAAPAHRLLAMFRGER 235
                  +RD    +  + S V  GKE  +   +RD++  SE     P+HR LA+FRG  
Sbjct: 180 TAELLGKVRDHLWNQGQVSSTVVEGKETAEEEKFRDYYAYSEPIRNVPSHRALALFRGRN 239

Query: 236 EELLDVRVRPDDD--------IAVGALHRRWLKGRASSAGTDAAEVATALTDAWNRLLAP 287
             +L V++   ++          V       ++ +  +A    ++V       W   + P
Sbjct: 240 AGVLFVKLGLGEEQDALNPHPCEVMIARHVGIENKGRAADKWLSDVCRW---CWRVKVQP 296

Query: 288 SLENEFRTALRERAEAEAIAVFAANLRELLLAPPMGPRRTLALDPGWRTGAKLVCLDAQG 347
            +E E  T LRE AEAEAI +F  NL +LLLA P GP+  + +DPG RTG K+  +D  G
Sbjct: 297 HIETELLTQLRESAEAEAIKIFGRNLHDLLLAAPAGPKAVMGIDPGIRTGCKVAVVDHTG 356

Query: 348 ALLHHEVIHPLTGGDRATRAAATLRELCTRHGIEAVAVGNGTAGRETEAFVKSA--GLPP 405
            LL    I+P         + ATL  L  +HG+  V++GNGTA RET+  V+      P 
Sbjct: 357 KLLETATIYPHEPRRDWNGSLATLARLAKQHGVALVSIGNGTASRETDKLVQDLMRNAPE 416

Query: 406 -HVTVALVDERGASVYSASEVARAEFPDHDVTVRGAISIGRRLMDPLAELVKVDPRSLGV 464
             +T  +V E GASVYSASE+A  EFP+ DV++RGA+SI RRL DPLAELVK+DP+S+GV
Sbjct: 417 LKLTKIVVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIDPKSIGV 476

Query: 465 GQYQHDVDQNALRRALEEVVASCVNAVGVDVNTASPELLAYVSGIGPALAKGIVALRAVN 524
           GQYQHDV+Q  L RAL+ +V  CVNAVGVDVNTAS  LLA VSG+   LAK IV  R  N
Sbjct: 477 GQYQHDVNQRELARALDAIVEDCVNAVGVDVNTASAPLLARVSGLNSILAKNIVEYRDAN 536

Query: 525 GPFRTRRDLLKVPRLGPKAFEQAAGFLRVHGGPEPLDASAVHPESYAVVRRMAEDTGCSV 584
           G F  R  L KVPRLG K FEQAAGFLR++ G  PLD S+VHPE+Y VV+R+ +     +
Sbjct: 537 GAFPNRDALKKVPRLGDKTFEQAAGFLRINDGDNPLDRSSVHPEAYPVVKRILDSIKKGI 596

Query: 585 PDLMRDATRREALRLERYVDDRVGLPTLRDIMSELARPGRDPRPAFEVFAFAEGVNKVDD 644
            D++ +      L    + D++ GLPT+ DI+SEL +PGRDPRP F+   F +GV  + D
Sbjct: 597 GDVLGNREALRGLTARDFTDEKFGLPTVVDILSELEKPGRDPRPEFKTATFQDGVEDIKD 656

Query: 645 VQPGMELPGIVTNVTKFGAFVDIGVHRDGLVHVSQLADRFVRDPAEVVAPGRKVRVRVLD 704
           +QPGM L G+VTNV  FGAF+DIGVH+DGLVHVS L+ +FVRDP EVV PG+ V+V+V++
Sbjct: 657 LQPGMVLEGVVTNVAAFGAFIDIGVHQDGLVHVSALSTKFVRDPHEVVKPGQIVKVKVME 716

Query: 705 VDRQRERINLTLK 717
           VD +R RI LT++
Sbjct: 717 VDVKRNRIGLTMR 729