Pairwise Alignments

Query, 464 a.a., CBS/transporter associated domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 438 a.a., CBS domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  211 bits (536), Expect = 5e-59
 Identities = 140/437 (32%), Positives = 235/437 (53%), Gaps = 14/437 (3%)

Query: 12  ILLLILLNGFFALAEMSLVTSRKPRLEAEAARGNRGAAVALRLLETPDSLFSTVQIGITL 71
           IL LI  + FF+++E++L  SRK RL   A  G+  A   L L   P S F+ VQIG+  
Sbjct: 10  ILCLIGASCFFSMSEIALAASRKIRLRQLADEGDARAEKVLHLQSYPGSFFTVVQIGLNA 69

Query: 72  IGILTGAFGGASVAAHLTHVLADMPAVAPYAASLAFGVVIIVTTYLTLIFGELVPKKMAF 131
           + I+ G  G ++   +    L+   A  P+ + ++F +  ++ T   ++  +L+PK++A 
Sbjct: 70  VAIMGGIVGESAFRPYFYQFLSSWLA-DPWLSQVSFLMSFLLVTSAFILVADLMPKRIAM 128

Query: 132 ASPERFACAVAPVMLVFMRLSMPAVWLLSLSSRAASTILRI---REDGPSVTDEDIRGML 188
           A PE+ A AV   M V + +  P VW  +  +     +L+I   R D   +T +DI  ++
Sbjct: 129 AMPEQVALAVVGPMSVCIAVLRPLVWFFNGMASGIFKLLQIPTARND--EITSDDIYAVM 186

Query: 189 AEGVRSGVVLDAERTMSERVMRLGDRSVTSIMTHRTRVAWLDSEAPQEDIIERLAASTYS 248
             G  +GV+   E+ M E V  +   SVTS MT R  + +   +  +EDI  ++A   ++
Sbjct: 187 NAGAEAGVLDKGEQQMMENVFEMQTVSVTSAMTARESLVYFLLQDSEEDIKRKIAEDPHT 246

Query: 249 RFPVCDGDLDNVLGVIKAREYLAACAEGADVTLK--NFMRQPVFIPETARALDLLEAFRT 306
           +F VCDG LD V G + A+E L     G ++TLK  + +   + IP+T    + +E F+ 
Sbjct: 247 KFLVCDGQLDMVKGFVDAKELLIRVINGENITLKDTSLVHTSLIIPDTLSLSEAMEYFKN 306

Query: 307 TPHVHFAMVVGEYGEVQGIVTLNDVLEAIVGDIPSPDEADEPEAVRRADGSWLLDGMMHI 366
           +    FA+V+ EY  V GIVT ND+  A++G   S  E++E + + R   SWL+DG+  I
Sbjct: 307 S-RADFAVVMNEYALVVGIVTTNDLQRAVMG-AWSLHESEE-QIIARDSNSWLVDGVTPI 363

Query: 367 DDMADVTGL-RLPDEKHGDFETLAGLLLQHLGKLPAIGDTLRLGPLHFEIVDMDGRRIDR 425
            D+    G+   P  +  ++ET+AG ++  L K+P   D +  G   FE+VD+D  ++D+
Sbjct: 364 TDVMRAFGIEEFPHSQ--NYETIAGFMMYMLRKIPKRTDFVNYGGYKFEVVDIDSYKVDQ 421

Query: 426 VLLSTAATVKDEYAPGT 442
           +L++   T +   +P T
Sbjct: 422 LLVTRIDTNEKLMSPDT 438