Pairwise Alignments

Query, 484 a.a., type II/III secretion system protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 718 a.a., type II and III secretion system protein:NolW-like protein:NolW-like protein from Pseudomonas syringae pv. syringae B728a

 Score =  105 bits (261), Expect = 7e-27
 Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 24/256 (9%)

Query: 175 VHQVMLEVKVAEMRRNVMERLGIDLTYAWRGDFIFGMLNQLFTLDSQKGVVDAGPSGAVL 234
           V QVM+E ++ E   +  ++LG+     W G        +  T        +AG +   L
Sbjct: 463 VRQVMIEARIVEANVDYNKQLGV----RWGGSTNTSGSGKWTTYGLDNNGDEAGNTSGNL 518

Query: 235 SPNVN----GAFRITSGQVSIMGF----------LDVLKQNGLVKVLAEPTLVCRSGEKA 280
           +PNV     GA   TSG    +GF          L  +++ G  +++++P +V    E A
Sbjct: 519 TPNVPFVDLGAAGATSGIG--LGFVTNNTLLDLELSAMEKTGNGEIVSQPKVVTSDKETA 576

Query: 281 EFLAGGEIPIPVPQGLGTVAIEYKEFGVTLQFLPTVVGDGRISMKVAPEVSELDYTNVVQ 340
           + L G EIP       G   + +KE  ++L+  P +  D RI M+V     E DY N V 
Sbjct: 577 KILKGTEIPYQESSSSGATTVSFKEASLSLEVTPQITPDNRIIMEVKVTKDEPDYLNAV- 635

Query: 341 IQGFTIPAITSRRASTTVELADGQSFAIAGLLRDDVRQAVNKYPVLGDMPVLGTLFRSSN 400
                +P I     +  V ++DG++  I G+  +   + V+K P LGD+P LG LFR   
Sbjct: 636 ---LGVPPIKKNEVNAKVLISDGETIVIGGVFSNTQSKVVDKVPFLGDVPYLGRLFRRDV 692

Query: 401 WQKNETELVIIVTPHL 416
             ++++EL++ +TP +
Sbjct: 693 VSESKSELLVFLTPRI 708