Pairwise Alignments

Query, 484 a.a., type II/III secretion system protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 575 a.a., pilus assembly protein CpaC from Paraburkholderia bryophila 376MFSha3.1

 Score =  258 bits (658), Expect = 5e-73
 Identities = 165/439 (37%), Positives = 245/439 (55%), Gaps = 54/439 (12%)

Query: 41  SELQVATGKSSVVSTSRPVGRLAIADEAIAGVVVLSPQQVYVTGKKAGTTTLTLWDGGGA 100
           S + V  GKS+++ T+ PV    + + +IA   ++SPQ +YV G   GTT + +    GA
Sbjct: 92  STVVVPIGKSTLMHTAEPVRNRTLGNPSIAQATMVSPQTLYVVGMAVGTTNMIVQGKSGA 151

Query: 101 VIGVYDVQVTPDIAQLKEMLHRVLPGENDIMVMGVNDTVTLAGTVRSAASMTTAMDMARL 160
              V +V V  D   L+  L +++P E +I V  V   + LAG V +A +   A ++A+ 
Sbjct: 152 C-EVINVVVNADSGGLQTSLSQLMPDEPNIRVSTVAGDLVLAGRVSNAQAANQAQEIAKA 210

Query: 161 YAPDK----------------VTNLMQVGGVHQVMLEVKVAEMRRNVMERLGIDLTY--- 201
           YA                   V N+M V    QVMLEVKVAE+ + V+ +LG  +     
Sbjct: 211 YARSSLPAANGASNGNAKAATVLNMMSVDSPQQVMLEVKVAEVSKTVLNQLGSAMNIQGG 270

Query: 202 --AWRGDFIFGMLNQLFTLDSQKGVVDAGPSGAVLSPNVNGAFRITSGQVSIMGFLDVLK 259
             +W G  I  +L  +        +VD   +        N  F +          +D   
Sbjct: 271 FGSWSGALISSLLAGV------SSIVDVNKAN-------NRPFNVA---------IDGQH 308

Query: 260 QNGLVKVLAEPTLVCRSGEKAEFLAGGEIPIPVPQ----GLGTVAIEYKEFGVTLQFLPT 315
            + LVK+LAEP LV  SG++A FLAGG++ IP+PQ    G+ T+ ++ +EFGV L+F PT
Sbjct: 309 GDNLVKILAEPNLVTLSGQEATFLAGGKVFIPIPQSNLNGVATIVLQEEEFGVGLKFTPT 368

Query: 316 VVGDGRISMKVAPEVSELDYTNVV----QIQGFTI-PAITSRRASTTVELADGQSFAIAG 370
           V+  GRI++KVAPEVSEL  T V          TI P IT+RRASTTV++ DG++FAI G
Sbjct: 369 VLAGGRINLKVAPEVSELSSTGVTVGATNTNNLTILPLITTRRASTTVQMNDGETFAIGG 428

Query: 371 LLRDDVRQAVNKYPVLGDMPVLGTLFRSSNWQKNETELVIIVTPHLAKPLEANAT-RLPT 429
           L++++    +   P +G++PVLG LFRS+++Q++ TELV I+TPHL KPL+  A   LPT
Sbjct: 429 LIKNNASGTLKAIPGVGEVPVLGALFRSTSYQQDRTELVFIITPHLVKPLQTAANLPLPT 488

Query: 430 DAYREPSAFEYFILGRMEG 448
           D  + P+  + +++G MEG
Sbjct: 489 DRLKTPNEADVYLMGNMEG 507