Pairwise Alignments

Query, 776 a.a., outer membrane protein, OMP85 family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 776 a.a., outer membrane transmembrane protein from Sinorhizobium meliloti 1021

 Score = 90.5 bits (223), Expect = 3e-22
 Identities = 126/489 (25%), Positives = 195/489 (39%), Gaps = 59/489 (12%)

Query: 329 GAPARADDILDAVARIPVFLHERGHPFAVVTGTRFEVDHAAHTLHATVTVDPGPYVLMGG 388
           G   +A DI   ++ I   +   G+PFA VT  R   D A HT+     VD G    +  
Sbjct: 306 GTVYKAKDIQSTMSEISKRVASEGYPFARVT-PRGNRDLANHTIAVDYLVDQGERAYVER 364

Query: 389 LDVEGADDVSRDYVATY---VGWRPGQPWDERLVERFRESLRGTGLFSGMEVVPADHDDA 445
           +++ G +  +RDYV      VG   G  +++ +V R +  L   G FS + +       A
Sbjct: 365 IEIRG-NTRTRDYVIRREFDVG--EGDAFNQEMVARAKRRLEALGYFSSVNI-STQPGSA 420

Query: 446 TGCRPVMARLTYGPPRSFGGGLRYDSALGPGVL--AFWEHRNLWGGGERLRLELPVWERR 503
                ++  +      SFG G  Y +  G G L  A  E +N  G G+ +RL     E  
Sbjct: 421 ADRVVIVVDVQDQSTGSFGIGAGYSAGDGGGFLVEASIEEKNFLGRGQYIRLAAGKGEDS 480

Query: 504 QEVVASFRKPFLL-----------RPDQDFIADAWARNENSDAYDQRAGAVSASVERRIS 552
           Q    SF +P+ L           + + DF  D ++ N+   +       V+A +   +S
Sbjct: 481 QTYNVSFTEPYFLGYRLAAGFDLFKNENDFDDDNYSYNDQGFSL-----RVTAPITENLS 535

Query: 553 RHLWASA------GGTTEGGSINDHQGPERSYSMWGVPLTIRYDGTDNLLDPHEGVRAAL 606
             L  +       G   E  S  D       ++   +  +I Y+  D+   PHEG+ A++
Sbjct: 536 TTLRYNYTELEYFGDRDELSSPYDRVIDGSPWTRSSISQSITYNTLDDAQLPHEGILASV 595

Query: 607 STTPYTGVYHEWRSMVRSRLDASAYTALPGGRTVLALRAAAGALHGESPA-DIPASFRFY 665
            T  + G+         +      YT       + +L  +AG L   S + ++   F+  
Sbjct: 596 -TQEFAGLGGTSDFYKLTGKAKWYYTLHDEADIIGSLSGSAGHLFETSGSLEVFDQFQLN 654

Query: 666 SGGGGSVRGYAYQSLGPR--DGDVPLGGGSFGEVGLEARTRITETLGL--------VTFV 715
           S     +RG+    LGPR  +GD  LGG ++     EA   +    GL          FV
Sbjct: 655 SN---DIRGFERNGLGPRMNNGDA-LGGTTYFTASAEATFPLP---GLPRDSGFRGALFV 707

Query: 716 DGGNVYE--------ESMPRFGDGMRFGAGVGLRYYTAIGPLRFDVATPVNPREDDAPLQ 767
           D G +Y         ES+      +R   GV L + +  GPLR D A PV   + D    
Sbjct: 708 DAGTLYGNDVEIGPGESVRGDNASLRASVGVSLIWASPFGPLRVDYAVPVAKEDFDEVQN 767

Query: 768 FYFSIGQSF 776
           F F I  SF
Sbjct: 768 FKFGINSSF 776



 Score = 30.8 bits (68), Expect = 3e-04
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)

Query: 171 RLRSDEDEARNVLHSRGFYAGRV---EGRLDAASSPLRVTLTLFPGPLY 216
           +LR+DE+  R   ++RG+   +V   E  L+ A++   VT+T+  GP Y
Sbjct: 230 KLRADEELLRQFYYNRGYADFQVVSSEAALNEATNEYTVTITIEEGPRY 278