Pairwise Alignments

Query, 776 a.a., outer membrane protein, OMP85 family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 765 a.a., outer membrane protein assembly factor BamA from Ralstonia sp. UNC404CL21Col

 Score = 92.4 bits (228), Expect = 8e-23
 Identities = 108/449 (24%), Positives = 181/449 (40%), Gaps = 29/449 (6%)

Query: 352 GHPFAVVTGTRFEVDHAAHTLHATVTVDPGPYVLMGGLDVEGADDVSRDYVATYVGWRPG 411
           G+ FA +   + +++ +  T+  T+ VDPG  V +  ++V G      + V   +     
Sbjct: 322 GYAFATIN-PQPQINQSDRTVALTLVVDPGRRVYVRRVNVVGNSKTRDEVVRREMRQMEA 380

Query: 412 QPWDERLVERFRESLRGTGLFSGMEVVPADHDDATGCRPVMARLTYGPPRSFGGGLRYDS 471
             +D   ++  +  +  TG F+   +   D    T    V   +T  P      G+ + S
Sbjct: 381 SWFDGEKLQLSQNRVNRTGYFTDANITTEDVPGTTDQVDVNVNVTEKPTGQINLGVGFSS 440

Query: 472 ALGPGVLAFWEHRNLWGGGERLRLELPVWERRQEVVASFRKPFLLRPDQDFIADAWARNE 531
                + A     N++G G  L L++   +  + +  +   P+          + + R  
Sbjct: 441 TDKLVLSAGIRQDNVFGSGTSLGLDVNTSKSNRTIAVTQFDPYFTVDGISRSTELYYRTY 500

Query: 532 NSDAYD--------QRAGAVSASVERRISRHLWASAG--GTTEGGSINDHQGPERSYSMW 581
               Y         Q+ G V   V    +  ++   G   TT   + N     +   +  
Sbjct: 501 RPLYYTGDQDYRVVQQGGNVKFGVPFSETDTVFFGIGYERTTIDVTTNTPLAYQNYVAKN 560

Query: 582 G-----VPLTIRY--DGTDNLLDPHEGVRAALSTTPYTGVYHEWRSMVRSRLDASAYTAL 634
           G      P+TI +  D  D+ L P  G R   +   + G+        R+      +  L
Sbjct: 561 GRITNNFPITIGWSKDQRDSALVPTRG-RYQQANLEF-GIPGGDLQYFRAYYQHQYFYPL 618

Query: 635 PGGRTVLALRAAAGALHGESPADIPASFRFYSGGGGSVRGYAYQSLGPRDGD-VPLGGGS 693
               T +A     G  HG    D P    +Y+GG GSVRGY   +LGPRD + V +GG S
Sbjct: 619 SKSFT-MAFNNEIGYGHGYGGKDFPVFKNYYAGGIGSVRGYETSTLGPRDANGVAIGGAS 677

Query: 694 FGEVGLE-----ARTRITETLGLVTFVDGGNVYEESMP-RFGDGMRFGAGVGLRYYTAIG 747
                +E       + +  T+ L TF D GNV+ E  P + GD MR+  G GL + + IG
Sbjct: 678 KFVGNVEFIFPLPGSGVDRTVRLFTFFDYGNVFAEGQPYKLGD-MRYSTGFGLSWLSPIG 736

Query: 748 PLRFDVATPVNPREDDAPLQFYFSIGQSF 776
           PL+  +  P+  + +D   +F F IG +F
Sbjct: 737 PLKISMGFPIKRKTEDQTQRFQFQIGTAF 765