Pairwise Alignments

Query, 776 a.a., outer membrane protein, OMP85 family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 769 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 94.0 bits (232), Expect = 3e-23
 Identities = 121/505 (23%), Positives = 195/505 (38%), Gaps = 48/505 (9%)

Query: 315 EGFPRALSDAGVAG-----------------GAPARADDILDAVARIPVFLHERGHPFAV 357
           EG P  ++  G+AG                 G    A+ +      I   L E G+ FA 
Sbjct: 270 EGEPYTIASIGLAGNLLDREAELKKLVNIKAGERFSAEKLQATTKAIVDKLGEYGYAFAT 329

Query: 358 VTGTRFEVDHAAHTLHATVTVDPGPYVLMGGLDVEGADDVSRDYVATYVGWRPGQPWDER 417
           V     ++D   HT+  T+ VDP   V +  ++V G      + V   +       +D  
Sbjct: 330 VNAVP-KIDQQRHTVDLTLQVDPSRRVYVRHINVVGNTRTRDEVVRREMRQLESSWFDSN 388

Query: 418 LVERFRESLRGTGLFSGMEVVPADHDDATGCRPVMARLTYGPPRSFGGGLRYDSALGPGV 477
            +   ++ +   G F+ ++V     + +     V  +++  P  +   G  + S     +
Sbjct: 389 RLTLSKDRVNRLGYFTDVDVTTVPVEGSPDQVDVDVKVSEKPTGAITLGAGFSSTDKVVL 448

Query: 478 LAFWEHRNLWGGGERLRLELPVWERRQEVVASFRKPFLLRPDQDFIADAWARNE----NS 533
            A     N++G G  L + +   +  + +  +   P+        I D + R      N 
Sbjct: 449 SAGVSQDNVFGSGTSLAVNVNTAKTYRTLTVTQTDPYFTVDGIKRITDVYYRTSYPLYNY 508

Query: 534 DAYDQRAGAVSASVERRI--SRHLWASAGGTTEGGSINDHQGPERSY----SMWG----- 582
                R   + A ++  I  S       G   E   +N      +SY    S +G     
Sbjct: 509 TDTSFRIITMGADLKFGIPFSEADTVYFGVGLEQNRLNTDSSTPQSYLDYVSEFGRVVNN 568

Query: 583 VPLTIRY--DGTDNLLDPHEGVRAALSTTPYTGVYHEWRSMVRSRLDASAYTALPGGRTV 640
           VPLT  +  D  D+ L P  G    + T    G         ++ + A  Y +   G  +
Sbjct: 569 VPLTTGWARDNRDSALVPSRGY--FIQTNGEVGTPAGGTEYYKADVQAQYYYSFARG-FI 625

Query: 641 LALRAAAGALHGESPADIPASFRFYSGGGGSVRGYAYQSLGPRD---GDVPLGGGSFGEV 697
           L L    G  +G +    P    +Y+GG GSVRGY   SLGP D   GD P+GG      
Sbjct: 626 LGLNLQGGYGNGFAGKAYPIFKNYYAGGIGSVRGYEAGSLGPTDKTTGD-PIGGSRMVVA 684

Query: 698 GLEARTRIT-----ETLGLVTFVDGGNVY-EESMPRFGDGMRFGAGVGLRYYTAIGPLRF 751
            +E    +       TL + TF+D GNV+ +E      +G+R+  G GL + + IGPL+ 
Sbjct: 685 NVEMTFPLPGSGWDRTLRVFTFLDAGNVWGDEGNSTGANGLRYSYGAGLEWISPIGPLKL 744

Query: 752 DVATPVNPREDDAPLQFYFSIGQSF 776
            +  PV     D   +F F IG SF
Sbjct: 745 SLGFPVVKHATDKYQKFQFQIGTSF 769