Pairwise Alignments

Query, 642 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 182 a.a., PBS lyase HEAT-like repeat (NCBI) from Rhodospirillum rubrum S1H

 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 44/141 (31%), Positives = 74/141 (52%), Gaps = 3/141 (2%)

Query: 49  VQEAVDNALRKIGGAAAVAGVIPLLRSDDAPIRNISMDILRDIGRDEFDALKQLLHDEDP 108
           V+  +  AL K+   A    +   LRSDDA +RN +++ L+++       L++LL D+D 
Sbjct: 42  VRAMIFTALIKLQTPAVARRLARFLRSDDAQLRNAAIEALQEMPAAIAPHLQELLTDDDS 101

Query: 109 DIRIFASDILGTSGSILAVPALCEALLRDPEVNVRYQAAVSLGTLAFPEAADCLNKAMQ- 167
           DIRIFA  ILGT     A   L E + R+  +NV   A  +L  +  PEA + L   +  
Sbjct: 102 DIRIFAVTILGTLRLTCAPDWLVEVIRRESHINVCSAAVDALAEIGGPEAIEDLEALLDR 161

Query: 168 --DEEWVQFSVIEALIKIRAE 186
              + +++F++   + +IR +
Sbjct: 162 FPGDSFMKFAIETTIRRIRGQ 182



 Score = 38.9 bits (89), Expect = 2e-07
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 8/151 (5%)

Query: 491 VDDVPDVRKVALEALAGTCPITPEHLELVVPLMHDPVREVRLALVDLFGACPEESVIGHL 550
           V+  P VR +   AL      TP     +   +     ++R A ++     P  ++  HL
Sbjct: 36  VETAPSVRAMIFTALIKLQ--TPAVARRLARFLRSDDAQLRNAAIEALQEMPA-AIAPHL 92

Query: 551 LEALDDEDDWVRVRAIEALGRLGRKECVTP-LIERVDGAGNL-VLLKIIEALGSIGGNMA 608
            E L D+D  +R+ A+  LG L R  C    L+E +    ++ V    ++AL  IGG  A
Sbjct: 93  QELLTDDDSDIRIFAVTILGTL-RLTCAPDWLVEVIRRESHINVCSAAVDALAEIGGPEA 151

Query: 609 FRALLALMEH--EDPEIQQAAEDAVARLGEQ 637
              L AL++    D  ++ A E  + R+  Q
Sbjct: 152 IEDLEALLDRFPGDSFMKFAIETTIRRIRGQ 182



 Score = 32.3 bits (72), Expect = 2e-05
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)

Query: 6   HILEVLQSDDAEQVREAAYSAGELRLEAAVPHLVRHLQSQ-NIGVQEAVDNALRKIGGAA 64
           H+ E+L  DD++    A    G LRL  A   LV  ++ + +I V  A  +AL +IGG  
Sbjct: 91  HLQELLTDDDSDIRIFAVTILGTLRLTCAPDWLVEVIRRESHINVCSAAVDALAEIGGPE 150

Query: 65  AVAGVIPLL 73
           A+  +  LL
Sbjct: 151 AIEDLEALL 159