Pairwise Alignments

Query, 641 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 559 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H

 Score =  334 bits (856), Expect = 7e-96
 Identities = 195/533 (36%), Positives = 304/533 (57%), Gaps = 17/533 (3%)

Query: 14  GGRPLLDGATLHVEAGERLCLVGRNGAGKSTLLRLMAGDLRPDAGEVVRAQGTRFGHMPQ 73
           GG+ +L G +L    G ++ ++G NGAGKST+LR+MAG  +   GE   A G + G++ Q
Sbjct: 19  GGKEILKGLSLSFLPGAKIGVLGPNGAGKSTVLRIMAGIDKEFGGEAWAADGVKIGYLAQ 78

Query: 74  DVPAHLSGSVYEVVAEGMGPDGVALAAYHRLETGHA---DSGTLDAA-------RHHLDT 123
           +     +  V   V +G+GP    L  +  +        D   ++A        +  +D 
Sbjct: 79  EPDLDPAKDVMGNVMDGVGPMKALLDRFEEVSAKFGEVVDDDEMNALIAEQAEIQEKIDA 138

Query: 124 GNGWERHGDMMTVLNHLHLDP-DARFEELSGGLKRRALLARALVSSSDVLL-DEPTNHLD 181
            +GW+    +   ++ L   P +A   +LSGG +RR  L R L+S  D+LL DEPTNHLD
Sbjct: 139 ADGWDLQRQVEIAMDALRCPPGEADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLD 198

Query: 182 IEAISWLEDFLQRRARTLVFVTHDRTFLRHLATRIVELDRGQLFAYDCGYDAYLERREER 241
            E++ WLE FLQ+   T+V +THDR FL + A  I+E+DRG+   Y+  Y  YLE +++R
Sbjct: 199 AESVGWLEHFLQQYPGTVVAITHDRYFLDNAANWILEVDRGRGIPYEGNYSTYLENKQKR 258

Query: 242 LENETRQNALFDKKLAQEEAWIRQGVKARRTRNMGRVRALQALRSERAERRERMGTAAMR 301
           LE E+R+    DK +++E  WIRQ  KAR+ ++  R+ A + L +      +++ +A + 
Sbjct: 259 LEQESREEGARDKTISRELEWIRQSPKARQAKSKARITAYENLVASAGS--QKVESAQIV 316

Query: 302 VHEAERSGKLVIEATGVTFAHGDSEPVLRDVDVCIQRGDRVGLIGPNGAGKTTLLRILLG 361
           +  AER G +VIEA G+T   GD   ++ D+   +  G  VG+IG NGAGKTTL +++ G
Sbjct: 317 IPIAERLGGVVIEAEGLTKGFGD-RLLIDDLTFRLPPGGIVGVIGANGAGKTTLFKMITG 375

Query: 362 DLEPQQGRVRHGTRLEVAYFDQMREALDIDANAMDNVANGNDRVTVNGVNRHVAGYLREF 421
             +P  G +R G  + + Y DQ R+ALD +      +++G D + +         Y+ +F
Sbjct: 376 KDQPDSGAIRIGETVRLGYVDQSRDALDPNKTVWQEISDGQDELDLGKRKIPSRAYVGQF 435

Query: 422 LFDDDRMRIAVRHLSGGERNRLLLARLFLRPSNVLVLDEPTNDLDVETLELLEELLTDYS 481
            F     +  V  LSGGERNR+ LA++    +NVL+LDEPTNDLDVETL  LE+ L +++
Sbjct: 436 NFKGSDQQKKVGQLSGGERNRVHLAKMLKSHANVLLLDEPTNDLDVETLRALEDALLEFA 495

Query: 482 GTVLLVSHDRTFLDNVVTSTIALEGQGIVREYIGGYEDWLRQRDEPQRPAREA 534
           G  +++SHDR FLD + T  ++ EG   V  + G +E +  + D+ +R   +A
Sbjct: 496 GCAVVISHDRWFLDRIATHILSFEGDSHVEWFEGNFEAY--EADKKRRLGADA 546



 Score = 92.8 bits (229), Expect = 4e-23
 Identities = 69/249 (27%), Positives = 118/249 (47%), Gaps = 30/249 (12%)

Query: 3   LLSLQNITLNLGGRPLLDGATLHVEAGERLCLVGRNGAGKSTLLRLMAGDLRPDAGEVVR 62
           ++  + +T   G R L+D  T  +  G  + ++G NGAGK+TL +++ G  +PD+G +  
Sbjct: 327 VIEAEGLTKGFGDRLLIDDLTFRLPPGGIVGVIGANGAGKTTLFKMITGKDQPDSGAIRI 386

Query: 63  AQGTRFGHMPQDVPA-HLSGSVYEVVAEGMGPDGVALAAYHRLETGHADSGTLDAARHHL 121
            +  R G++ Q   A   + +V++ +++G                           +  L
Sbjct: 387 GETVRLGYVDQSRDALDPNKTVWQEISDG---------------------------QDEL 419

Query: 122 DTGNGWERHGDMMTVLNHLHLDPDARFEELSGGLKRRALLARALVSSSDV-LLDEPTNHL 180
           D G         +   N    D   +  +LSGG + R  LA+ L S ++V LLDEPTN L
Sbjct: 420 DLGKRKIPSRAYVGQFNFKGSDQQKKVGQLSGGERNRVHLAKMLKSHANVLLLDEPTNDL 479

Query: 181 DIEAISWLEDFLQRRARTLVFVTHDRTFLRHLATRIVELD-RGQLFAYDCGYDAYLERRE 239
           D+E +  LED L   A   V ++HDR FL  +AT I+  +    +  ++  ++AY   ++
Sbjct: 480 DVETLRALEDALLEFAGCAVVISHDRWFLDRIATHILSFEGDSHVEWFEGNFEAYEADKK 539

Query: 240 ERLENETRQ 248
            RL  +  Q
Sbjct: 540 RRLGADADQ 548