Pairwise Alignments

Query, 641 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 640 a.a., ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  561 bits (1446), Expect = e-164
 Identities = 314/650 (48%), Positives = 417/650 (64%), Gaps = 29/650 (4%)

Query: 1   MALLSLQNITLNLGGRPLLDGATLHVEAGERLCLVGRNGAGKSTLLRLMAGDLRPDAGEV 60
           MA++SL +  L  G   LLD A   +E GER+ L+GRNG GKS+LL+++AG  + D G +
Sbjct: 1   MAVISLSDAQLAFGHVALLDHAEFSLETGERIGLIGRNGTGKSSLLKIIAGRSKLDDGLL 60

Query: 61  VRAQGTRFGHMPQDVPAHLSGSVYEVVAEGMGPDGVALAAYHRLETGHADSGTLDAA--R 118
           V  Q  +  ++ Q+       +V++ VA G+G     LA Y  + TG       DA   R
Sbjct: 61  VMQQNLKIAYVDQEPHFPEEMTVFDAVASGLGELPALLAEYEAI-TGQFGGDNDDALLER 119

Query: 119 HH-----LDTGNGWERHGDMMTVLNHLHLDPDARFEELSGGLKRRALLARALVSSSDVLL 173
            H     LD  + W     + T L+ L+L+ DAR  ELSGG+K+R  LA  LV + DVLL
Sbjct: 120 MHQIQTVLDAADAWSIGNKVETTLDKLNLNRDARIGELSGGMKKRVALACGLVGNPDVLL 179

Query: 174 -DEPTNHLDIEAISWLEDFLQRRARTLVFVTHDRTFLRHLATRIVELDRGQLFAYDCGYD 232
            DEPTNHLD  +I WLE  L+    +++F+THDR+FL +++TRI+ELDRG++ ++   + 
Sbjct: 180 LDEPTNHLDFGSILWLEGLLRDFKGSILFITHDRSFLDNVSTRIIELDRGKILSFPGNFT 239

Query: 233 AYLERREERLENETRQNALFDKKLAQEEAWIRQGVKARRTRNMGRVRALQALRSERAERR 292
            Y  R+ E L NE  +NA FDK LAQEE WIR+GV+ARRTR+ GRVR L+ALR +R+ERR
Sbjct: 240 TYQTRKAELLANEEVENAKFDKFLAQEEVWIRKGVQARRTRDEGRVRRLEALRVQRSERR 299

Query: 293 ERMGTAAMRVHEAERSGKLVIEATGVTFAHGDSEPVLRDVDVCIQRGDRVGLIGPNGAGK 352
           ER G   + V   ERSGK+V E   V  A+G  + ++RD    + RGD+VGLIG NGAGK
Sbjct: 300 ERQGQVKLEVGTGERSGKIVAELENVNKAYGP-KTIVRDFSTILMRGDKVGLIGQNGAGK 358

Query: 353 TTLLRILLGDLEPQQGRVRHGTRLEVAYFDQMREALDIDANAMDNVANGNDRVTVNGVNR 412
           TTLL+++LG+  P  G V+ GT+++VAYFDQMR  L+ +    D +A G+D V VNG  +
Sbjct: 359 TTLLKLILGEEAPDSGTVKQGTKMQVAYFDQMRAQLNEETTLADTIAPGSDWVEVNGQRK 418

Query: 413 HVAGYLREFLFDDDRMRIAVRHLSGGERNRLLLARLFLRPSNVLVLDEPTNDLDVETLEL 472
           HV  YL +FLF  +R R  VR LSGGERNRLLLARLF +P+NVLVLDEPTNDLD++TLEL
Sbjct: 419 HVMTYLSDFLFAPERARSPVRTLSGGERNRLLLARLFAKPANVLVLDEPTNDLDIDTLEL 478

Query: 473 LEELLTDYSGTVLLVSHDRTFLDNVVTSTIALEGQGIVREYIGGYEDWLRQRDEPQRPAR 532
           LEELL +Y GTV LVSHDR FLDNVVT  IA EG G+ REY+GGY DW RQR  P + A 
Sbjct: 479 LEELLEEYEGTVFLVSHDRMFLDNVVTQVIASEGNGVWREYVGGYSDWERQR--PAQQAA 536

Query: 533 EARDVATATQPAERRAVDT----------RPRKLTFKEQRELAEARDELEQLPARLEALE 582
            ++  A A   +E +A  T            +KL++KEQR       EL++LP R+ ALE
Sbjct: 537 SSKAAAKAADKSEVKAESTMAAPVVAPVAAKKKLSYKEQR-------ELDELPKRIAALE 589

Query: 583 TEQAVLERRLADPASFGSDMSALTETGERLASLEEQQLTLLERWEELEAR 632
            EQ  L  +LADP  +        +  +R A ++E+ L  LERWEE+E +
Sbjct: 590 AEQKELSAKLADPDLYKKGADEAVKLNQRFAEIDEELLVSLERWEEIEGK 639