Pairwise Alignments

Query, 440 a.a., methionine transporter from the Na+/H+ antiporter superfamily (Dmitry Rodionov) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 508 a.a., Na+/H+ antiporter (RefSeq) from Shewanella amazonensis SB2B

 Score = 65.1 bits (157), Expect = 5e-15
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 5/195 (2%)

Query: 22  GTGSILSFTGVKMAFYELSPAVAILPALALALIMGHGGLSKKINIMLAGAGEINIITMCV 81
           G  + L+   V  A    S    +L AL +AL  G G     I++++   G  ++     
Sbjct: 278 GMAAWLAAADVGAAMRNASLTAVVLAAL-MALWCGRGLHPLMIDMLV---GLRSMALAVG 333

Query: 82  IYLLAGGFASVAKAIGGVDATVNLGLSLIPAEFILPGLFLIAAFVSTAMGTSMGTIAAVG 141
           I LL     ++ K +G       L   L+    +L G+F + A ++ A GTS GT A + 
Sbjct: 334 ILLLTWMIGALIKDLGSAARISALANDLLSPSLLLAGIFALCAIMAFATGTSWGTFAIMI 393

Query: 142 PIAVGIGQQTDIGLAM-LMGSVVGGAMFGDNLSMISDTTIAATRTQGCEMGDKFRMNLLI 200
           P+   + Q     L +  + +V+ G++FGD+ S ISDT+I +    G  + +     L  
Sbjct: 394 PLCAQVAQGMAPELLLPALAAVMAGSVFGDHCSPISDTSILSATASGAAVHEHVTTQLPF 453

Query: 201 ALPAAVGATLLFWLM 215
           AL AA+ A   F L+
Sbjct: 454 ALIAAIAALCGFQLL 468



 Score = 40.8 bits (94), Expect = 1e-07
 Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 24/218 (11%)

Query: 228 EMARVLPYVVILAMALAGMNVFVVLFTGIVLAGGVGVAVVPGYSVLQWAKDIYAGFSGMH 287
           ++  ++P ++ L +AL      + L  G+VL   +     P  S+      + + F    
Sbjct: 5   DLLELIPLILTLVLALLLRRTLIALGAGVVLGALILNDFSPVTSLKYLLNTLTSQFYQQS 64

Query: 288 E-------ILVLSMLMGGLGELIRYQGGLAWLLERIGRMTSDRRDGRTR-RLGEAGISLL 339
           +       +L   +L+G +  L+   G +    +  G   S R   R + R+G  G+  L
Sbjct: 65  QWQWWHLNVLFAMLLLGIMTSLLGRSGAV----DEFGHWLSARVHSRRQARMGIIGLGFL 120

Query: 340 VSLANLCTANNTVAIILTGGMARGLAETNGVDPRRSASMLDIFSCVVQGLI------PYG 393
           V +  + +       +  G + R +A   G+ P + + M+D  +  +  L+      PY 
Sbjct: 121 VFIDGIFSC------LAVGSVGRPIARQYGMSPAQLSYMVDTTASPLCSLVPVASWGPYV 174

Query: 394 AQVLLAGSIAGISPVDVSLSNMYCYLLCVAALASIALG 431
             +L A S   +S +D  ++        V+AL  + LG
Sbjct: 175 MALLAAISFLPVSALDAFIAIASVNFYAVSALVLVGLG 212



 Score = 32.0 bits (71), Expect = 5e-05
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 14/106 (13%)

Query: 130 MGTSMGTIAAVGPIAVGIGQQTDIGLAMLMGSV-VGGAMFGDNLSMISDTTIAATRTQGC 188
           +G  +G +A    +A G+    + G+A  + +  VG AM   +L+ +    +AA     C
Sbjct: 256 LGLLVGALAFT--LASGVTLAKEPGMAAWLAAADVGAAMRNASLTAV---VLAALMALWC 310

Query: 189 EMG-DKFRMNLLIALPA---AVGATLLFWLMG----DSGQAARVGA 226
             G     +++L+ L +   AVG  LL W++G    D G AAR+ A
Sbjct: 311 GRGLHPLMIDMLVGLRSMALAVGILLLTWMIGALIKDLGSAARISA 356