Pairwise Alignments

Query, 582 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  234 bits (597), Expect = 7e-66
 Identities = 164/578 (28%), Positives = 282/578 (48%), Gaps = 50/578 (8%)

Query: 1   MKLTHKLAIAFGSLVLVIIVVGGFSVNRLGLIHDDVQEIASNWIPSIKILAKMQGDMNRI 60
           M++  +  + F  + L++ ++G F++ R+  +  D +++    +P+I++L ++  +   I
Sbjct: 5   MRIALRAGLGFAVVALLVFLLGVFALTRIAAMEGDAEKVDQRLLPTIQLLGQVNQEFLMI 64

Query: 61  RRQQLQHIIATDASAIASIESNIEKLKQQLQDSARIYEKLVSDPSERGNFEKFLDHTRQY 120
           R   L+ +I+  A      E+ ++ L++ L    +  ++L+ D   +     F     +Y
Sbjct: 65  RASTLRLLISEPAERSRGAET-LDGLRKTLAQERQDLDRLIQDTEGKALLANFDQSLARY 123

Query: 121 YRAMDKGMELSRVNKNVEAAALDRSEIRGHFQAAMDALYAAVEINDKGSAQSAAEATNVV 180
                + +EL+  N+  EA  + R E+  H ++   A+Y  + +N   +  ++A A  V 
Sbjct: 124 ESFQRRIVELALQNRMEEAIEITRGELNEHARSTSKAVYDLIGLNRNAANAASAHALEVA 183

Query: 181 SSARTFSIVLVLVAIAIGAGAGVYIVRGTMAQLGEDPGYLYDVSREIASGNLDIHFRE-- 238
           +SA    +V +++A        + + R  +  L E  G    V+  IA G+L  HF+   
Sbjct: 184 ASAFQGVVVAMILAFIATIILAMLLTRSIVQPLAEAVG----VAEVIAGGDLTRHFQVVG 239

Query: 239 SSHRQGVYSAVQDMVTTLKAKIAEADEKSEQARRKEQEAQQATLEAEEARRQAERAKAEG 298
           S     + SA+Q M  +L+  I    + S Q                             
Sbjct: 240 SDEPARLLSALQAMQRSLRETIQGISDSSNQ----------------------------- 270

Query: 299 MLQAAVKLEGVVEVLSSASEELSAQIEQSDRGAEEQARRVGETATAMEEMNATVLEVARN 358
                         L+SA+EEL+   E S RG  +Q   + + ATA+ EM A V EVARN
Sbjct: 271 --------------LASAAEELNVVTEDSTRGLHQQNHEIEQAATAVNEMTAAVDEVARN 316

Query: 359 AGQAADIAENTRRKAESGAEIVGRVVTGISEVQSQSVALKHDMEDLGRQAEAIGQIMNVI 418
           A   ++ +  +   A+ G + V R V  I  +         ++E L  Q   I ++++VI
Sbjct: 317 AVATSEASRESDETAQHGRQQVIRTVDSIGLLADDVTQTATEVERLAGQVRDISKVLDVI 376

Query: 419 SDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMQATTEVGNAIRGVQGGT 478
             IA+QTNLLALNAAIEAARAG+AGRGFAVVADEVR LA +T Q+T E+   I  V  GT
Sbjct: 377 RSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQSTQEIEQMIGDVHQGT 436

Query: 479 RKNMDNVDRSVKTIEEATQAARLSGEALREIVKMVDTVSDQVRGIATASEQQSAASEEIN 538
            K +  +  S +      + AR +GEAL  I   +  +S++   IA+ASE+Q+  + E++
Sbjct: 437 DKAVHAMQLSNERARTTLELARAAGEALDGIASAISQISERNLVIASASEEQAQVAREVD 496

Query: 539 KSVEQVSAISAETAQAMREAATAVQELANQSQVLKRLV 576
           +++  +  +S +++    + + A QELA  +  L  LV
Sbjct: 497 RNLVNIRDLSLQSSAGANQTSAASQELARLAIDLNNLV 534