Pairwise Alignments

Query, 582 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 619 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  201 bits (512), Expect = 6e-56
 Identities = 126/321 (39%), Positives = 183/321 (57%), Gaps = 8/321 (2%)

Query: 256 LKAKIAEADEKSEQARRKEQEAQQATLEAEEARRQAERAKAEGMLQAAVKLEGVVEVLSS 315
           L  ++A+ D    Q   ++ E  Q  L+    R      +  G L+     +GV ++ +S
Sbjct: 302 LAERVADGDLTHNQVVTRKDELGQ--LQGSMMRMTGNLRELIGGLR-----DGVTQI-AS 353

Query: 316 ASEELSAQIEQSDRGAEEQARRVGETATAMEEMNATVLEVARNAGQAADIAENTRRKAES 375
           A+E+LSA  EQ+  G   Q     + ATAM EM+ATV EVARNA QA+  A N  ++A  
Sbjct: 354 AAEQLSAVTEQTSAGVNSQKNETDQVATAMHEMSATVQEVARNAEQASHAAVNASKEARE 413

Query: 376 GAEIVGRVVTGISEVQSQSVALKHDMEDLGRQAEAIGQIMNVISDIADQTNLLALNAAIE 435
           G  +V + V  I ++ ++    K  M+DL  ++  IG +++VI  +A+QTNLLALNAAIE
Sbjct: 414 GDGVVSKAVAQIEKLATEVTHSKSAMDDLKNESNKIGGVLDVIKAVAEQTNLLALNAAIE 473

Query: 436 AARAGEAGRGFAVVADEVRKLAEKTMQATTEVGNAIRGVQGGTRKNMDNVDRSVKTIEEA 495
           AARAGEAGRGFAVVADEVR LA++T  +T E+   I G+   T +    +D S      +
Sbjct: 474 AARAGEAGRGFAVVADEVRSLAQRTQTSTEEIAALISGLHTRTAQVATILDNSQALTANS 533

Query: 496 TQAARLSGEALREIVKMVDTVSDQVRGIATASEQQSAASEEINKSVEQVSAISAETAQAM 555
            +  R +G ++  + + + T+      IA A+E+QSA +EEIN+SV  V  IS +TA A 
Sbjct: 534 VELTRNAGVSINNMTQAISTIETMNHQIAAAAEEQSAVAEEINRSVLNVRDISEQTASAS 593

Query: 556 REAATAVQELANQSQVLKRLV 576
            E A +  ELA     L+ LV
Sbjct: 594 EETAASSVELARLGVHLQSLV 614



 Score = 41.2 bits (95), Expect = 1e-07
 Identities = 54/267 (20%), Positives = 108/267 (40%), Gaps = 34/267 (12%)

Query: 225 REIASGNLDIHFRESSHRQGVYSAVQDMVTTLKAKIAEADEKSEQARRKEQEAQQATLEA 284
           RE+  G  D   + +S  + + +  +     + ++  E D+ +          Q+    A
Sbjct: 338 RELIGGLRDGVTQIASAAEQLSAVTEQTSAGVNSQKNETDQVATAMHEMSATVQEVARNA 397

Query: 285 EEARRQAERAKAEGMLQAAVKLEGVVEVLSSASEELSAQIEQSDRGAEE---QARRVGET 341
           E+A   A  A  E     A + +GVV    +  E+L+ ++  S    ++   ++ ++G  
Sbjct: 398 EQASHAAVNASKE-----AREGDGVVSKAVAQIEKLATEVTHSKSAMDDLKNESNKIGGV 452

Query: 342 ATAM----EEMNATVLEVARNAGQA----------ADIAENTRRKAESGAEIVGRVVTG- 386
              +    E+ N   L  A  A +A          AD   +  ++ ++  E +  +++G 
Sbjct: 453 LDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQTSTEEIAALISGL 512

Query: 387 ------ISEVQSQSVALKHDMEDLGRQA-EAIGQIMNVISDIADQTNLLALNAAIEAARA 439
                 ++ +   S AL  +  +L R A  +I  +   IS I    + +A  A  ++A A
Sbjct: 513 HTRTAQVATILDNSQALTANSVELTRNAGVSINNMTQAISTIETMNHQIAAAAEEQSAVA 572

Query: 440 GEAGRGFAVVADEVRKLAEKTMQATTE 466
            E  R        VR ++E+T  A+ E
Sbjct: 573 EEINRSVL----NVRDISEQTASASEE 595



 Score = 29.6 bits (65), Expect = 4e-04
 Identities = 48/278 (17%), Positives = 97/278 (34%), Gaps = 49/278 (17%)

Query: 324 IEQSDRGAEEQARRVGETATAMEEMNATVLEVARNAGQAADIAENTRRKAESGAEIVGRV 383
           + +SD G   Q   + +  T  ++M   +       G    +    R  AE+    V   
Sbjct: 139 VARSDDGTPAQRDAIVQAMTLFQKMRFDL------RGYTYSLKAENRAPAETSMNTVIEF 192

Query: 384 VTGISEVQSQSVALKHDMEDLGRQAEAIGQI-----------------MNVISDIADQTN 426
           V  +     QS  +KH ++ +      + Q                  + ++ + AD+ +
Sbjct: 193 VRNLQGFDGQSAIIKHLVDSMISYQNTLNQFTAAQARIDLAQAGITKDIGILFECADKLS 252

Query: 427 LLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMQATTEVGNAIRGVQGGTRKNMDNVD 486
              +N  +E     +      ++A  +         A   + N I G    T K  + V 
Sbjct: 253 ENQVNLRVEDVSQAKMLLSVWLIAALIMSAL-----AAWVITNLIVGPLRDTLKLAERVA 307

Query: 487 RSVKTIEEATQAARLSGEALREIVKMVDTVSDQVRGIATASEQQSAASEEINKSVEQVSA 546
               T  +        G+    +++M   + + + G+     Q ++A+E       Q+SA
Sbjct: 308 DGDLTHNQVVTRKDELGQLQGSMMRMTGNLRELIGGLRDGVTQIASAAE-------QLSA 360

Query: 547 ISAET--------------AQAMREAATAVQELANQSQ 570
           ++ +T              A AM E +  VQE+A  ++
Sbjct: 361 VTEQTSAGVNSQKNETDQVATAMHEMSATVQEVARNAE 398