Pairwise Alignments

Query, 582 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 562 a.a., chemotaxis sensory transducer (NCBI) from Rhodospirillum rubrum S1H

 Score =  245 bits (625), Expect = 4e-69
 Identities = 170/585 (29%), Positives = 293/585 (50%), Gaps = 38/585 (6%)

Query: 1   MKLTHKLAIAFGSLVLVIIVVGGFSVNRLGLIHDDVQEIASNWIPSIKILAKMQGDMNRI 60
           +++  KL IAF SL L+ +  G  S+ +L  +    + I  NW+PSI+ LA ++  +   
Sbjct: 7   LRIPQKLLIAFCSLALLFVGAGIISLVQLRAVSGATEIIVENWLPSIRALAALELQVIEH 66

Query: 61  RRQQLQHIIATDASAIASIESNIEKLKQQLQDSARIYEKLVSDPSERGNFEKFLDHTRQY 120
           RR ++ HI+ TDA  +A+ +  I K ++ +  +   YEKL++   ER  +++F      Y
Sbjct: 67  RRFEMSHIMTTDAPGMAAEDERIRKQRELIAKTQATYEKLINSAEERAIYDRFATQWTTY 126

Query: 121 YRAMDKGMELSRVNKNVEAAALDRSEIRGHFQAAMDALYAAVEINDKGSAQSAAEATNVV 180
               ++ +ELSR NKN EA  +   E R  F     AL  A+++N+KG+ ++A EA    
Sbjct: 127 LALTEQVIELSRTNKNTEARDMQLGESRAAFNQMRAALVEAIDLNNKGAKKAAEEAYQSD 186

Query: 181 SSARTFSIVLVLVAIAIGAGAGVYIVRGTMAQLGEDPGYLYDVSREIASG--NLDIHFRE 238
           S A+    VL++    +  G  V+      A + +    +  + R +A G   +DI  R+
Sbjct: 187 SDAQ----VLIITVTVVILGLVVFFTLLLRAAIAKPIVSITTIMRRLAEGERTIDIPARD 242

Query: 239 SSHRQGVYSAVQDMV--TTLKAKIAEADEKSEQARRKEQEAQQATLEAEEARRQAERAKA 296
                G  +   ++     ++A+  E ++++E+A R+++     TL     R        
Sbjct: 243 RKDEIGDMAGAVEVFKDNAIRAEQLENEQRAERANREKRSQTIETLMGTFDRAVGNVLAV 302

Query: 297 EGMLQAAVKLEGVVEVLSSASEELSAQIEQSDRGAEEQARRVGETATAMEEMNATVLEVA 356
             +  AA ++E   + ++S +E+ S Q        EE +  V   A+A EE+ A++ E+ 
Sbjct: 303 --VAGAATEMESTAQAMTSNAEQTSRQAIAVSSATEEASAGVQTVASASEELAASISEIG 360

Query: 357 RNAGQAADIAENTRRKAESGAEIVGRVVTGISEVQSQSVALKHDMEDLGRQAEAIGQIMN 416
           R   Q    +    R A   A      V+G++E  ++                 IG ++ 
Sbjct: 361 RQVEQ----SNAASRLASEEAARASVTVSGLAETSTR-----------------IGTVVG 399

Query: 417 VISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMQATTEVGNAIRGVQG 476
           +I+ IA+QTNLLALNA IEAARAG+AG+GFAVVA EV+ LA +T +AT E+   I  VQ 
Sbjct: 400 LITHIANQTNLLALNATIEAARAGDAGKGFAVVAGEVKSLANQTAKATEEISAQIGAVQQ 459

Query: 477 GTRKNMDNVDRSVKTIEEATQAARLSGEALREIVKMVDTVSDQVRGIATASEQQSAASEE 536
            T++ ++ +   V+ IEE T  +     A+ E     + ++  V+ +A       A ++E
Sbjct: 460 ATQQAVEAIATIVRRIEETTHISTAIASAVEEQAAATNEIAQNVQRVA-------AGTQE 512

Query: 537 INKSVEQVSAISAETAQAMREAATAVQELANQSQVLKRLVDDLKR 581
           ++ S+  V+  + ET  A ++  +A Q L+ +S  LK +VD   R
Sbjct: 513 VSASIGGVTQAADETGGAAQQVLSAAQSLSRESAELKEMVDHFLR 557