Pairwise Alignments

Query, 582 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 564 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  223 bits (568), Expect = 2e-62
 Identities = 173/594 (29%), Positives = 293/594 (49%), Gaps = 78/594 (13%)

Query: 6   KLAIAFGSLVLVIIVVGGFSVNRLGLIHDDVQEIASNWIPSIKILAKMQGDMNRIRRQQL 65
           K+      L++ +  +G  SV +L  ++ +  EI +NW+P++ +L +M+ ++   R +  
Sbjct: 10  KIVTLVALLLVALSGLGALSVLKLSSMNTNTVEITTNWLPTVTVLGEMRAEVLSYRMKLR 69

Query: 66  QHIIATDASAIASIESNIEKLKQQLQDSARIYEKLVSDPSERGNFEKFLDHTRQYYRAMD 125
            H++ T+   +A+IE  I+ +  +++DS + YE L+S P ER  ++K+++   +Y   + 
Sbjct: 70  DHLLETNDDKMAAIEKQIDAISGKIKDSQKRYEALISSPEERQIYQKWVEAWGKYRALVP 129

Query: 126 KGMELSRVNKN----VEAAALDRSEIRGHFQAAMDALYAAVEINDKGSAQSAAEATNVVS 181
           K ++LSR   N    VE A+L  + +          L   +++N+KG+  +++ A    S
Sbjct: 130 KLIDLSRKATNGQISVEGASLLSNTLTPLADQMDVELQKDIDLNNKGADDASSAAAATYS 189

Query: 182 SARTFSIVLVLVAIAIGAG--AGVYIVRGTMAQLGEDPGYLYDVSREIASGNL--DIHFR 237
           SA  F IV+ ++A+ I  G  A + ++R     +      +    +E+  GNL  D+  R
Sbjct: 190 SA--FLIVVAILALTIVGGIFASILVIRDITLAIAS----IISPMQELGKGNLAADVPHR 243

Query: 238 ESSHRQGVYSAVQDMVTTLK-AKIAEADEKSEQARRKEQEAQQATLEAEEARRQAERAKA 296
             S   G    + D +   K A +A+ D  +  A+  E++  +A    + A RQ E A  
Sbjct: 244 GESTEIG---RMADALQVFKEALVAKRDADAAAAKEAEEKIARAQ-RVDSATRQFEHAIG 299

Query: 297 E---GMLQAAVKLEGVVEVLSSASEELSAQIEQSDRGAEEQARRVGETATAMEEMNATVL 353
           E    +  A+ +LE     L+S +E            +EE +  V   A+A EEM +++ 
Sbjct: 300 EIVDTVSSASTELEASASTLTSTAERAQELATSVAAASEEASTNVQSVASATEEMTSSIT 359

Query: 354 EVARNAGQAADIAENTRRKAESGAEIVGRVVTGISEVQSQSVALKHDMEDLGRQAEAIGQ 413
           E++R   ++A IA +   +A    E V                      DL   A  IG 
Sbjct: 360 EISRQVQESARIANDAVDQARRTNESVS---------------------DLSHAAARIGD 398

Query: 414 IMNVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMQATTEVGNAIRG 473
           ++ +I+ IA QTNLLALNA IEAARAGEAGRGFAVVA EV+ LAE+T +AT E+   I G
Sbjct: 399 VVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTAKATGEISQHITG 458

Query: 474 VQGGTRKNMDNVDRSVKTIEEATQAARLSGEALREIVKMVDTVSDQVRGIATASEQQSAA 533
           +Q  T +++D                     A++EI + +  +S+    IA+A E+Q AA
Sbjct: 459 IQTATGQSVD---------------------AIKEIGQTIGRMSEIASTIASAVEEQGAA 497

Query: 534 SEEINKSVEQ--------------VSAISAETAQAMREAATAVQELANQSQVLK 573
           ++EI+++V+Q              V   + ET  A  +  +A Q L+  S  LK
Sbjct: 498 TQEISRNVQQAAHGTQQVSSNITDVQRGATETGSASSQVLSAAQSLSQDSNRLK 551



 Score = 35.8 bits (81), Expect = 5e-06
 Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 464 TTEVG---NAIRGVQGGTRKNMDNVDRSVKTIEEATQAARLSGEALRE----IVKMVDTV 516
           +TE+G   +A++  +       D    + K  EE    A+    A R+    I ++VDTV
Sbjct: 246 STEIGRMADALQVFKEALVAKRDADAAAAKEAEEKIARAQRVDSATRQFEHAIGEIVDTV 305

Query: 517 SDQVRGIATASEQQSAASEEINKSVEQVSAISAETAQAMREAATAVQELANQSQVLKRLV 576
           S       +AS +  A++  +  + E+   ++   A A  EA+T VQ +A+ ++ +   +
Sbjct: 306 S-------SASTELEASASTLTSTAERAQELATSVAAASEEASTNVQSVASATEEMTSSI 358

Query: 577 DDLKR 581
            ++ R
Sbjct: 359 TEISR 363