Pairwise Alignments

Query, 187 a.a., conserved domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 228 a.a., Sel1 domain protein repeat-containing protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  207 bits (528), Expect = 8e-59
 Identities = 105/184 (57%), Positives = 129/184 (70%), Gaps = 1/184 (0%)

Query: 3   SEHHEALNLYAVRVARGEGVKQDFARAASLFRRADRCGFNCEPVYDDMVNDFRDKAFGME 62
           +EHHEALN Y V  A G+GV QDF +A  LFR+AD+CG+NCEPVYDD+  DFRDK FGME
Sbjct: 40  AEHHEALNFYGVLHATGKGVAQDFGKALELFRKADKCGYNCEPVYDDLPTDFRDKQFGME 99

Query: 63  LVSSKRAFLKALRPETAEARCTVGEAFIGQG-DADSLRTGRELLTSAATLGSGKAMYLLG 121
           LV++KR F++  R   AEARC VG A+ G+  DA S +  REL  SAATLG+GKAM+LLG
Sbjct: 100 LVAAKRDFVRKARLLAAEARCNVGLAYHGEATDATSRKVARELFLSAATLGNGKAMHLLG 159

Query: 122 VLCRDGKGVAANAERAFMWFSLAASCGFAKAESERVNAEGKLDDAGRTRAMQLAARWRRQ 181
            +CRDG GV A+  RA+MWF LA + GFAKA   R     ++ D    RA +LAARW R 
Sbjct: 160 TMCRDGAGVPASEVRAYMWFDLAVTAGFAKAGDARRELIDRMKDKDVARAEKLAARWLRC 219

Query: 182 YLAP 185
           +  P
Sbjct: 220 FPLP 223



 Score = 32.0 bits (71), Expect = 8e-06
 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 79  AEARCTVGEAFI-GQGDADSLRTGRELLTSAATLGSGKAMYLLGVLCRDGKGVAANAERA 137
           A A+  +G  +  G G A       + L  AA     +A+   GVL   GKGVA +  +A
Sbjct: 7   ASAQFNLGMLYYEGNGVAQDFGKAAQWLGRAAKAEHHEALNFYGVLHATGKGVAQDFGKA 66

Query: 138 FMWFSLAASCGF 149
              F  A  CG+
Sbjct: 67  LELFRKADKCGY 78



 Score = 30.4 bits (67), Expect = 2e-05
 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 109 ATLGSGKAMYLLGVLCRDGKGVAANAERAFMWFSLAASCGFAKAE-SERVNAEGKLDDAG 167
           A  G   A + LG+L  +G GVA +  +A  W   A     AKAE  E +N  G L   G
Sbjct: 2   AEAGDASAQFNLGMLYYEGNGVAQDFGKAAQWLGRA-----AKAEHHEALNFYGVLHATG 56

Query: 168 R 168
           +
Sbjct: 57  K 57