Pairwise Alignments

Query, 697 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 748 a.a., Chemotaxis protein histidine kinase and related kinases from Pseudomonas stutzeri RCH2

 Score =  299 bits (765), Expect = 4e-85
 Identities = 166/386 (43%), Positives = 236/386 (61%), Gaps = 5/386 (1%)

Query: 303 VAQAAEASSSSIRVESAKLDRLVGFVGELVILQSRLSQLVRGVPDDAMREVAEGLERLAG 362
           V +      S IRV + KLD L+  VGELVI  +      +   D A  E  + +     
Sbjct: 329 VREKRNQEHSQIRVAAHKLDELINLVGELVISAAGAQLRAQLKGDAACIESTQTVNLHVE 388

Query: 363 SLRDSAMSMRMVPMGSTFHSFRRLVRDLAAQLGKKVLFEAEGGDTELDKTLIDQLRDPLL 422
            +R++A+ +RM+ +G TF+ F R+VRD++ QLGK +  E +G DTELDK +ID+L DPL 
Sbjct: 389 QIREAALKLRMIEIGDTFNRFHRVVRDVSQQLGKDIRLEIQGADTELDKAVIDRLADPLT 448

Query: 423 HLLRNAMDHGIEPPEVRLATGKPEEGVVRLGASHSGGEVHIYVSDDGAGVDLEKVRLRAV 482
           HL+RNA+DHGIEP E RLA GKP EG +RL A H  G + I V+DDG G++ +++R +A+
Sbjct: 449 HLVRNAIDHGIEPAEQRLAAGKPAEGHLRLDAYHESGMIVIEVADDGRGLNTQRIREKAI 508

Query: 483 AMGLIPPETEPDTATLLALLYVPGFTTAPGVSEISGRGVGMDVVHSAIAALRGSLDMETT 542
           A GLI  +       +  L++  GF+TA  VS++SGRGVGMDVV SAI ALRG++++++ 
Sbjct: 509 ARGLIDAQANLSDHDVQMLIFAAGFSTADNVSDLSGRGVGMDVVRSAIDALRGTIEIDSR 568

Query: 543 PGRGTTCHIRLPLTLAIIDGMRVLVGGDSYIVPLTMVEACLE---RFVDGAVRTVECIEY 599
           PG G T  IRLPLTLAIIDG  + +G D +++PL MV  CLE     +DGA      ++ 
Sbjct: 569 PGAGCTFRIRLPLTLAIIDGFLISLGDDYFVIPLDMVTECLELEADQLDGA--AYGYLDL 626

Query: 600 RGRLIPCVSLRLLLGVPGEQPGYERVIVAGKEGHEVGFAVDAVVGLQQAVIKGVGNLCRN 659
           RGR +PC+SL     +         +IV      + G  VD + G  Q VIK +G L ++
Sbjct: 627 RGRPLPCLSLAAHFKLREAPSKRRNIIVVSHGRQQAGLIVDHLHGELQTVIKPLGQLFQH 686

Query: 660 VAWISGTTVDADGGISLILDVVQLIR 685
           +  I G+T+   G ++LILD+  L R
Sbjct: 687 LQGIGGSTILGSGQVALILDIPSLFR 712



 Score = 74.7 bits (182), Expect = 2e-17
 Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 3/103 (2%)

Query: 11  FGDEARELLIDMESLFLELEQTPDDRALVARVFRTMHTLKGSGAMFGYTEAARVAHALED 70
           F +EAR+L    E   L+LEQTP D   +  +FR MHTLKGS  +F  T      H LE 
Sbjct: 14  FVEEARDLAKQAEEYLLQLEQTPTDEDAINGLFRAMHTLKGSAGLFSLTPLVNFTHHLES 73

Query: 71  VFDRVRHGRLPLTSELLGLCLEAKDHLQT---LLEGDPADVPV 110
           +  +VR G+  LT  LL L L   D +     L++ D  ++PV
Sbjct: 74  LLMKVREGQQALTPVLLDLLLRGLDEINAMVELIDADSGELPV 116