Pairwise Alignments

Query, 312 a.a., TPR domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 333 a.a., tol-pal system protein YbgF (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  369 bits (948), Expect = e-107
 Identities = 199/333 (59%), Positives = 246/333 (73%), Gaps = 21/333 (6%)

Query: 1   MKKHLATGIILPVCAVTALTA---CVRQGDFDALQSRVLRQEQQQQQLNMQLSGVQPAQA 57
           MK  + +   LPVC++ AL A   CVRQ D DAL +RV+RQ+QQ Q LN QLSGVQPAQA
Sbjct: 1   MKTRILSRRFLPVCSLAALVALVGCVRQEDVDALNARVMRQDQQIQTLNSQLSGVQPAQA 60

Query: 58  DTWSQVQSMRQELATMRGQIDDMRYKLDSFG-KSGDVAAMRDQLSKHDAALRQIASQFDV 116
           DTWSQVQS RQE+AT+RGQIDDM+ +L++ G +S D+  MRDQL++HD ALRQ+ASQ  +
Sbjct: 61  DTWSQVQSTRQEIATLRGQIDDMQMRLNATGDQSRDLPQMRDQLNRHDIALRQMASQLAI 120

Query: 117 ELK--LDQPQADAAGALAPSTEPGHDG-------------ASRFVVAAETKTSGPVTVPP 161
           +L   L  P    A   A +T   H G              + FVVA  ++ SGPVTVPP
Sbjct: 121 DLDSVLAAPAPAGAAGAASATGTTHAGDPNAPVLLVNPGKENGFVVAPSSQPSGPVTVPP 180

Query: 162 TQSGTLAVSNGTPAQQ-PA-AAKPAAPAADTATALYDTGISSFNSRNYKDALKSFKDFTD 219
            QSGT+AV++  PA+  PA AAKPAA A DTA ALYD G+++FN R YKD++K+F DFT+
Sbjct: 181 AQSGTMAVTSAEPAKAAPAPAAKPAAAAVDTAQALYDQGMTAFNERRYKDSVKAFTDFTN 240

Query: 220 TFPNHKLTSNAWFWQGETNFQMNNFPAAALAYEQVISKFPKSSKLPSALLKQGICFYKTG 279
           TF +HKLTSNAWFWQGE NFQ  +F  +ALAYEQVISK+PKS K  S+LLKQGICFYK G
Sbjct: 241 TFGDHKLTSNAWFWQGEANFQQQDFARSALAYEQVISKYPKSPKYASSLLKQGICFYKLG 300

Query: 280 KKDAGKIRLEELIKKHPDSPEAKRAQQYIKDNK 312
           KKDAGK+RLEELIKK PDSPEA+RA++++ +NK
Sbjct: 301 KKDAGKVRLEELIKKLPDSPEAQRAKKFLSENK 333