Pairwise Alignments

Query, 311 a.a., peptidyl-prolyl cis-trans isomerase domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 431 a.a., chaperone SurA from Vibrio cholerae E7946 ATCC 55056

 Score = 62.0 bits (149), Expect = 2e-14
 Identities = 71/320 (22%), Positives = 142/320 (44%), Gaps = 28/320 (8%)

Query: 6   SLLLAALVLCLSATGAAADSLNRIAAVVNGEMITYFDVQAQAAPEILRAGLDPVRDADAE 65
           +L+     L L    A    L+ +A +VN  +I   DV +  A + ++A     ++    
Sbjct: 7   TLISVLSALTLFNAHAEPKQLDSVAVIVNSGVILQSDVDS--ALKTIKANAK--QNKQPL 62

Query: 66  PVRRITRN-VLDSMISDILISQEAERLKITVQDSEVDNEYRKIVQRSQLAPEQFERQLAQ 124
           P   + R  VL+ +I D L  QEA+R+ + + D+ ++   ++I + +Q   EQ    +AQ
Sbjct: 63  PQETVLREQVLEKLIIDTLQQQEADRIGVKIDDNRLNEAIKEIAKNNQQTQEQLIASVAQ 122

Query: 125 QGLSADLMRERIRRGILRHRLLGLMIARKVVVTR---DEIAKYYEAHKGQFVSGRKVRLG 181
           +GL+    RE++R+ +        ++ R++ +     D +A+         V  +   + 
Sbjct: 123 EGLTYPEFREQVRKEMAASDARNALVRRRINILPAEVDTLAELLAQETDATVQYKISHIQ 182

Query: 182 LVIFPPRDD------ADALAAQVKSGAMTFADLAARHSIGPNPQNGGVIGDLLWSDLSME 235
           L +   +D       A+ L   +++GA  FA +A  +S GP    GG  G +   ++   
Sbjct: 183 LRVDDGQDKSTAETLANKLVNDLRNGA-DFAQMAYAYSKGPKALQGGDWGWMRKEEMPTI 241

Query: 236 WRDTLSELKPGDVSRVFLVEGRKAV-LQLVASNEGKGQALDDVAE-EIENILREPKM--- 290
           + D +     G +   F    R  V   ++  ++ KG     V E    +IL +P +   
Sbjct: 242 FADQIKMQNKGSIIGPF----RSGVGFHILKIDDVKGLETVAVTEVNARHILIKPTIILS 297

Query: 291 ----QERLQEYIGQLRSRAV 306
               Q++L E++ ++++  V
Sbjct: 298 DEGAQKQLNEFVQRIKNGEV 317



 Score = 30.0 bits (66), Expect = 1e-04
 Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 14/120 (11%)

Query: 197 QVKSGAMTFADLAARHSIGPNPQNGGVIGDLLWSDLSM---EWRDTLSELKPGDVSRVFL 253
           ++K+G +TFA+LA ++S   +P +    G+L +    +   E++  +  L  G +S  F 
Sbjct: 311 RIKNGEVTFAELAQQYS--QDPGSAAQKGELGYQTPDLYVPEFKHQIETLPVGQISEPFK 368

Query: 254 VEGRKAVLQLVASNEGKGQALDDVAEEIEN----ILREPKMQERLQEYIGQLRSRAVIDI 309
                 +++++   E     +D     ++N    IL   K  E    ++ +LR+ A +++
Sbjct: 369 TVHGWHIVEVLDRRE-----VDRTDSALKNKAYRILFNRKFNEEASAWLQELRASAFVEV 423