Pairwise Alignments

Query, 311 a.a., peptidyl-prolyl cis-trans isomerase domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 496 a.a., molecular chaperone SurA from Herbaspirillum seropedicae SmR1

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 70/260 (26%), Positives = 120/260 (46%), Gaps = 20/260 (7%)

Query: 26  LNRIAAVVNGEMITYFDVQAQAAPEILRAGLDPVRDADAEPVRRITRNVLDSMISDILIS 85
           ++ I  VVN E+IT  +V  + A  + R     V+     P  ++ R +++ MI +   +
Sbjct: 89  VDSIMVVVNNEVITRQEVADRLASVVKRMSAQNVQ---LPPRDQLVRQLVERMIVERAQA 145

Query: 86  QEAERLKITVQDSEVDNEYRKIVQRSQLAPEQFERQLAQQGLSADLMRERIRRGILRHRL 145
           Q A+   I V D+ +D   ++I  +++L+  QF  +L  +G++    RE IRR IL  RL
Sbjct: 146 QMAKENGIVVDDAMLDRAMQRIADQNKLSMAQFRTRLEAEGMNYASFREEIRREILSQRL 205

Query: 146 LGLMIARKVVVTRDEIAKYYEAHKGQFVSGRKVRLGLV--------------IFPPRDDA 191
               +  KVVVT  E+  Y  A       G++  L +               +   R+ A
Sbjct: 206 REREVDNKVVVTESEVDNYLAAEAN--AGGQRQELDIAQILIRVPENATPDQLAQRRERA 263

Query: 192 DALAAQVKSGAMTFADLAARHSIGPNPQNGGVIGDLLWSDLSMEWRDTLSELKPGDVSRV 251
           + +  Q+K+GA  FA  AA +S   +  +GG +G      L   + D +++L+ G VS +
Sbjct: 264 EDVLRQLKTGA-DFAKTAAAYSDASDALSGGDLGWRPADRLPQLFLDGVAKLQDGQVSGL 322

Query: 252 FLVEGRKAVLQLVASNEGKG 271
                   +L+LV      G
Sbjct: 323 LKSGNGFHILKLVGRRTADG 342



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 11/122 (9%)

Query: 194 LAAQVKSGAMTFADLAARHSIGPNPQNGGVIGDLLWSDLSMEWRDTLSELKPGDVSRVFL 253
           L  ++  G+ TF +LA  +S   +   GG +G +   D   E+   + +LKPG+VS+   
Sbjct: 378 LKERLDHGSATFEELAKLYSNDLSASKGGDLGWVYPGDTVPEFERAMDQLKPGEVSQPIE 437

Query: 254 VEGRKAVLQLVASNEGKGQALDDVAEE-----IENILREPKMQERLQEYIGQLRSRAVID 308
                 ++Q+V       +  DD ++E         +RE K+ E  ++++ Q+R RA ++
Sbjct: 438 TPFGYHLIQVVE------RKTDDASKERARQAARQAIRERKIDEATEDWMRQIRDRAYVE 491

Query: 309 IR 310
            R
Sbjct: 492 YR 493