Pairwise Alignments

Query, 388 a.a., major facilitator superfamily protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 420 a.a., Tetracycline-efflux transporter from Xanthomonas campestris pv. campestris strain 8004

 Score = 96.3 bits (238), Expect = 1e-24
 Identities = 108/412 (26%), Positives = 169/412 (41%), Gaps = 40/412 (9%)

Query: 2   PEKAPTLRIGRH---LLLVFGITLMVVMGVSSIMPILPDLARTF---DMPMSS--VGMVF 53
           P+ A     GR    L+ +F   L+ V+    I+P+LPDL R F   D   ++  +G   
Sbjct: 5   PDSASAPAPGRRRAALIFIFITVLIDVLSFGVIIPVLPDLVRQFTGGDYAAAAGWIGWFG 64

Query: 54  MAFTLPGVVLTPLGGILADRIGRKKVLIPSLLLFAAGGVACAFAPSLPVLLACRFVQGIG 113
             F     V +PL G L+DR GR+ V++ S L      +  A A +LP+LL  R + G+ 
Sbjct: 65  FLFAAIQFVCSPLQGTLSDRYGRRPVILLSCLGLGLDFILMALAHTLPMLLLARVISGVC 124

Query: 114 AAPLGVLYTTIIGDLYDGNQRMQAMGFNAGVLSLGTAIYPAVGGLLGELGWRVPF----- 168
           +A         I D+   ++R  A G       +G    P +GG LG +G R PF     
Sbjct: 125 SASFSTA-NAYIADVTPADKRAGAFGMLGAAFGIGFVAGPLIGGWLGSIGLRWPFWFAAG 183

Query: 169 LLPLLALPLCFAIARTTFPEPRSSQGMGEYFRSTWGIISSPRAITLFLLTLFTFLILYGP 228
           L  L  L   F +  +  PE R+++    +      +    R   +F L    FL     
Sbjct: 184 LALLNVLYGWFVLPESLPPERRTARLDWSHANPFGALKLLRRYPQVFGLASVVFLANLAH 243

Query: 229 MV--TFFPVLADQQFHATPSQIGFVFS-IASAGTVLTAVRLGTLARLIRPVRLLLASHG- 284
            V  + F + A  Q+H  P ++ +V + +     ++ AV +G + R +   R LL   G 
Sbjct: 244 YVYPSIFVLFASYQYHWGPREVSWVLAGVGVCSIIVNAVLVGRIVRWLGERRALLLGLGC 303

Query: 285 ------LYALAMVTMPF---VP-SLWWALAPVFIFGLAQGLNIPNTATLLTDLAPMEGRA 334
                 +Y LA     F   VP S +WA+A             P    L+T     + + 
Sbjct: 304 GVIGFVIYGLADSGHTFLLGVPISAFWAVA------------APAAQALITREVGADAQG 351

Query: 335 AIMAVNGTVLRLAQTIGPVLAGIAFATGGLSGVYTFGAFMAASMAALILARG 386
            +     +++ L    GP+L    FA    SG           +A L+LA G
Sbjct: 352 RVQGALTSLVSLGGIAGPLLFANVFAWFIGSGAPLHLPGAPWLLAGLLLAAG 403