Pairwise Alignments

Query, 771 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 543 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  183 bits (464), Expect = 2e-50
 Identities = 111/299 (37%), Positives = 167/299 (55%), Gaps = 14/299 (4%)

Query: 485 NKRIGEAATQAETVSQNLSE-------AAATLEGQID-------QAARGSDIQRQRTAEA 530
           N  +G  A  +E + QNL +       A   L   ++       Q+A G   Q+ +  + 
Sbjct: 243 NDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEMTQISNQSADGMKEQQYQITQV 302

Query: 531 ATAMEQMNASVMEVARNAAGAAEQAETARHKAQEGASALDDSVRTIREAKQLADTLREHM 590
           ATAM QM A+V +VARN   +A QA  A HK+QEGA      VR+I++   +     + +
Sbjct: 303 ATAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGEAGQTV 362

Query: 591 GELGKQAEDIGRVLDVIADIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTM 650
            EL +Q+  I  V+DVI  IADQTNLLALNAAIEAARAGE+GRGFAVVADEVR LA +T 
Sbjct: 363 SELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAGRTQ 422

Query: 651 NATREVDTAIKGIQTSARSNIDNTRKATDAIEVGTGMVGKSGEILREIVRLVETTADSVR 710
           ++T E+ T I+ +Q  A+   D T ++  +I+        S  ++  I   +   AD   
Sbjct: 423 DSTGEITTIIEKLQVMAKQAKDATERSRSSIDKCVEQGNHSQSLMISIEESIANIADVGT 482

Query: 711 NIATASEEQSAASEQITRSTDEINRIASETADAMQQSARAVQDVASLADELHGVIEEMR 769
            IA+A  EQ + +++++R+ + I+  + E A   QQ+A+A +++  LA  L   +   +
Sbjct: 483 QIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLAVSLQDTLRRFK 541



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 73/368 (19%), Positives = 139/368 (37%), Gaps = 29/368 (7%)

Query: 291 VIALGIMAAAIALMSRSMVTRPTALLCEYANAIAGGNLNARLEGTF--RHELGTLADAMG 348
           +  L IM     L++R ++  P A++ + +NAIA G+L+  ++ +     ELGTLA+A  
Sbjct: 196 IAILAIMVLMTWLLTR-LICGPLAIVMKQSNAIAKGDLSQTMDRSSIGNDELGTLANASE 254

Query: 349 RMVEDLKHRLGFAQGVLNGMVVPVLIVDREERTLFINQPCLDMLQLDGTPEQQHGRTLAE 408
           +M ++L+  +      +  +   V     EE T   NQ        DG  EQQ+  T   
Sbjct: 255 QMQQNLRQLIDEIISAVTQLSSAV-----EEMTQISNQ------SADGMKEQQYQITQVA 303

Query: 409 VFYNDPGRQTAVGRAMNERKAITNIDVTIKGHKGG--EVQVLANVTYLADTDGNIFGGFC 466
                     A      E  A   +    K  +G      ++ ++  +AD  G       
Sbjct: 304 TAMAQMKAAVADVARNTEDSASQAMAANHKSQEGARENASMVRSIQQVADIIGE------ 357

Query: 467 LYLDVTEARRQQAFIAEQNKRIGEAATQAETVSQNLSEAAATLEGQIDQAARGSDIQRQR 526
               V+E  +Q + I      I   A Q   ++ N +  AA    +  ++ RG  +    
Sbjct: 358 AGQTVSELEQQSSQINVVVDVIRSIADQTNLLALNAAIEAA----RAGESGRGFAVVADE 413

Query: 527 TAEAATAMEQMNASVMEVARNAAGAAEQAETARHKAQEGASALDDSVRTIREAKQLADTL 586
               A   +     +  +       A+QA+ A  +++   S++D  V     ++ L  ++
Sbjct: 414 VRTLAGRTQDSTGEITTIIEKLQVMAKQAKDATERSR---SSIDKCVEQGNHSQSLMISI 470

Query: 587 REHMGELGKQAEDIGRVLDVIADIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLA 646
            E +  +      I         +AD+ +    N  + +    +  +  A    E+ +LA
Sbjct: 471 EESIANIADVGTQIASACSEQDSVADELSRNVENIHLASQEVAQGSQQTAQACRELTQLA 530

Query: 647 EKTMNATR 654
               +  R
Sbjct: 531 VSLQDTLR 538



 Score = 26.6 bits (57), Expect = 0.004
 Identities = 12/56 (21%), Positives = 26/56 (46%)

Query: 713 ATASEEQSAASEQITRSTDEINRIASETADAMQQSARAVQDVASLADELHGVIEEM 768
           A A  + S   ++ +   DE+  +A+ +    Q   + + ++ S   +L   +EEM
Sbjct: 226 AIAKGDLSQTMDRSSIGNDELGTLANASEQMQQNLRQLIDEIISAVTQLSSAVEEM 281