Pairwise Alignments

Query, 371 a.a., peptide chain release factor 2, programmed frameshift (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 376 a.a., Peptide chain release factor 2 (NCBI) from Desulfovibrio vulgaris Miyazaki F

 Score =  630 bits (1626), Expect = 0.0
 Identities = 308/376 (81%), Positives = 343/376 (91%), Gaps = 5/376 (1%)

Query: 1   MLHLPELRTRSTTLFEQFSTLWGRLDLAGNRHRLSEIEKQLSTPDAWNNPEKLTPVLQEK 60
           ML L ELR RS  L +Q+++LWGRLDLAGNR+RL EIE+QLS+PDAWNNPEKLTPVLQEK
Sbjct: 1   MLQLAELRARSAALIDQYASLWGRLDLAGNRNRLDEIERQLSSPDAWNNPEKLTPVLQEK 60

Query: 61  SMLEGEINRLEALETCRNDVSEWLLLAEEDESA-----EALESLEEQIIRLEQLIEETEM 115
           S LEGEI RLE LETCR DV+EWL LAEE+E+A     EALESL EQ+  L+ L++ETEM
Sbjct: 61  SQLEGEITRLERLETCRRDVTEWLTLAEEEEAAGEPGQEALESLAEQVTVLQNLLQETEM 120

Query: 116 NLLLSGKEDRFAALLEIHPGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAG 175
           N+LLSGKEDR  A++EIHPGAGGTEAQDWAEML+RMYLRWADTH  K EYLDYL GDEAG
Sbjct: 121 NMLLSGKEDRMPAIVEIHPGAGGTEAQDWAEMLVRMYLRWADTHDMKAEYLDYLAGDEAG 180

Query: 176 IKSVTLRIAGPNAYGLLKGERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIK 235
           +KSVTLR+AGPNAYGLLKGE+GIHRLIRISPFD+SGRRHTSFASVDVIPDVGQ+I ++IK
Sbjct: 181 VKSVTLRMAGPNAYGLLKGEKGIHRLIRISPFDSSGRRHTSFASVDVIPDVGQEITVDIK 240

Query: 236 DTDLRIDVFRSSGPGGQSVNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRL 295
           +TDLRID+FRSSGPGGQSVNTTSSAVR+TH+PTGI AQCQNEKSQH N+D+A+QILR RL
Sbjct: 241 ETDLRIDIFRSSGPGGQSVNTTSSAVRITHLPTGISAQCQNEKSQHSNRDTAMQILRARL 300

Query: 296 YELELRKLEEEKKAQYGAKDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLD 355
           YELELRKLEEEKKAQY  KDAIGFGSQIRTYTLQPYRLVKDHRTNTE+GDVEAVLDGR+D
Sbjct: 301 YELELRKLEEEKKAQYAGKDAIGFGSQIRTYTLQPYRLVKDHRTNTEIGDVEAVLDGRID 360

Query: 356 KLLRDYLLYLHGQKTN 371
           +LLRDYLLYLHGQKTN
Sbjct: 361 QLLRDYLLYLHGQKTN 376