Pairwise Alignments

Query, 371 a.a., peptide chain release factor 2, programmed frameshift (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 375 a.a., peptide chain release factor 2 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  304 bits (779), Expect = 2e-87
 Identities = 158/353 (44%), Positives = 218/353 (61%), Gaps = 1/353 (0%)

Query: 6   ELRTRSTTLFEQFSTLWGRLDLAGNRHRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEG 65
           E++     + +    L  RLD     HRL E +  +  P+ WN+  +   +++++ ML  
Sbjct: 4   EIQNTVEAIRKSLDLLAQRLDYETAPHRLEEFDAMIEDPNLWNDQARAQKLMRDRQMLVD 63

Query: 66  EINRLEALETCRNDVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDR 125
            +   E ++    D  E + L E +  AE +   EE +  L +   + E+  LL G+ D 
Sbjct: 64  AMKTYEGIKQELEDNIELIELGEMEADAEVVTDAEEALKSLAETAAKKEIEALLDGEADG 123

Query: 126 FAALLEIHPGAGGTEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAG 185
               LEI+ GAGGTE+ DWA ML RMY+RWA+  GY  E      G+EAGIKS   +I+G
Sbjct: 124 NDTFLEINSGAGGTESCDWASMLARMYVRWAEAKGYTVELQSQSPGEEAGIKSAAYKISG 183

Query: 186 PNAYGLLKGERGIHRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFR 245
           PNAYG LK E G+HRL+RISP+D++ RRHTSF+SV V P V  +I+IE+   D+RID +R
Sbjct: 184 PNAYGWLKSESGVHRLVRISPYDSAARRHTSFSSVWVYPVVDDNIEIEVNPADIRIDTYR 243

Query: 246 SSGPGGQSVNTTSSAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEE 305
           SSG GGQ VNTT SAVR+TH+PTGIV    +EKSQH N+D A++ L+ RLY++EL +   
Sbjct: 244 SSGAGGQHVNTTDSAVRITHVPTGIVT-TSSEKSQHQNRDIAMKALKSRLYQMELDRRNA 302

Query: 306 EKKAQYGAKDAIGFGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLL 358
                + AK   G+G+QIR+Y LQPY++VKD RT  E  D   VLDG LD L+
Sbjct: 303 AINEAHEAKGDAGWGNQIRSYVLQPYQMVKDLRTGYETSDTAGVLDGDLDGLM 355