Pairwise Alignments

Query, 371 a.a., peptide chain release factor 2, programmed frameshift (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 360 a.a., peptide chain release factor 1 from Burkholderia phytofirmans PsJN

 Score =  201 bits (510), Expect = 3e-56
 Identities = 126/330 (38%), Positives = 184/330 (55%), Gaps = 7/330 (2%)

Query: 33  RLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEALETCRNDVSEWL-LLAEEDE 91
           RL+E+   LS  D  +N ++   + +E + L   ++         ND +    LLA+   
Sbjct: 15  RLAELNDLLSREDITSNLDQYRKLTREHAELGPVVDHYALWRQAMNDATTAQELLADASM 74

Query: 92  SAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIHPGAGGTEAQDWAEMLLRM 151
              A + +     R+E+L  E +  LL     D     LEI  G GG E+  +A  LLRM
Sbjct: 75  RDFAEDEIRAARERMEKLGAELQKMLLPKDPNDDRNIFLEIRAGTGGDESALFAGDLLRM 134

Query: 152 YLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLKGERGIHRLIRISPFDASG 211
           YLR+A+ + ++ E +   + D  G K V +RIAG  AY  LK E G HR+ R+   +  G
Sbjct: 135 YLRFAERNRWQVEMMSASESDLGGYKEVIVRIAGEAAYSKLKFESGGHRVQRVPATETQG 194

Query: 212 RRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTSSAVRVTHIPTGIV 271
           R HTS  +V V+P+  +  ++EI   DLRID FR+SG GGQ +N T SAVRVTH+PTGIV
Sbjct: 195 RIHTSACTVAVMPEADEIGEVEINPADLRIDTFRASGAGGQHINKTDSAVRVTHLPTGIV 254

Query: 272 AQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGAKDAIGFG---SQIRTYTL 328
            +CQ+++SQH NKD AL++L  R+ + +    E++ K     K  IG G    +IRTY  
Sbjct: 255 VECQDDRSQHKNKDRALKVLAARIKDKQSH--EQQAKEAATRKSLIGSGDRSERIRTYNF 312

Query: 329 QPYRLVKDHRTNTEVGDVEAVLDGRLDKLL 358
              RL  DHR N  +  ++A++DG LD+L+
Sbjct: 313 PQGRLT-DHRINLTLYRLDAIMDGDLDELI 341