Pairwise Alignments

Query, 371 a.a., peptide chain release factor 2, programmed frameshift (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 352 a.a., peptide chain release factor 2 (RefSeq) from Shewanella sp. ANA-3

 Score =  321 bits (823), Expect = 2e-92
 Identities = 160/340 (47%), Positives = 220/340 (64%), Gaps = 1/340 (0%)

Query: 19  STLWGRLDLAGNRHRLSEIEKQLSTPDAWNNPEKLTPVLQEKSMLEGEINRLEALETCRN 78
           S L G  D      RL E+ ++L + + WN PE+   + +E++ LE  +  ++ ++    
Sbjct: 6   SFLGGIFDYDAKHERLEEVSRELESSEVWNEPERAQALGKERASLEAVVKTIDDMDAGLE 65

Query: 79  DVSEWLLLAEEDESAEALESLEEQIIRLEQLIEETEMNLLLSGKEDRFAALLEIHPGAGG 138
           DV   L LA E+E  +      +++  LE  + E E   + SG+ D     L+I  G+GG
Sbjct: 66  DVEGLLELAIEEEDEDTFNETTKELDYLESRLAELEFRRMFSGQHDASDCYLDIQSGSGG 125

Query: 139 TEAQDWAEMLLRMYLRWADTHGYKTEYLDYLDGDEAGIKSVTLRIAGPNAYGLLKGERGI 198
           TEAQDWA M+LRMYLRW + HG+  E ++  DGD AGIK  T++  G  A+G L+ E G+
Sbjct: 126 TEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGV 185

Query: 199 HRLIRISPFDASGRRHTSFASVDVIPDVGQDIKIEIKDTDLRIDVFRSSGPGGQSVNTTS 258
           HRL+R SPFD+SGRRHTSF SV V P++  DI I+I   DLRIDV+R+SG GGQ VN T 
Sbjct: 186 HRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPADLRIDVYRASGAGGQHVNRTE 245

Query: 259 SAVRVTHIPTGIVAQCQNEKSQHHNKDSALQILRGRLYELELRKLEEEKKAQYGAKDAIG 318
           SAVR+TH+PT  V QCQN++SQH NKDSA++ L+ +L+ELE+ K   EK+A   AK  IG
Sbjct: 246 SAVRITHLPTNTVVQCQNDRSQHKNKDSAMKQLKAKLFELEMHKQNAEKQAAEDAKSDIG 305

Query: 319 FGSQIRTYTLQPYRLVKDHRTNTEVGDVEAVLDGRLDKLL 358
           +GSQIR+Y L   R +KD RT+ E  + +AVLDG LDK +
Sbjct: 306 WGSQIRSYVLDDSR-IKDLRTSVETRNTQAVLDGDLDKFI 344