Pairwise Alignments

Query, 287 a.a., protoheme IX farnesyltransferase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 308 a.a., protoheme IX farnesyltransferase (RefSeq) from Shewanella loihica PV-4

 Score = 84.7 bits (208), Expect = 2e-21
 Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 19  LMVAGATFFGAMLAVPHVTITHLLASLATFLLAGGCSAINQVQEADLDAVIPRTASRPIP 78
           + V G     A   V  V +   L  L+  ++A GC AIN   + D+DA + RT  R   
Sbjct: 31  IAVVGGFLLAARGEVDAVLMLATLVGLS-LVVASGC-AINNYIDRDIDAKMQRTCRRATV 88

Query: 79  CGRIGHMYGSLMGLALVTVGWMVLCLAGGLTSLLVGIGIVAVYNGLYTP-LKRRTSFALL 137
            G I       +G+AL  +G+ +L     L +LL       VY GLY+  +KR + +  L
Sbjct: 89  TGAIPLKQVLGLGIALGVLGFGLLAWFTNLAALLFAAFGYLVYVGLYSLYMKRNSVYGTL 148

Query: 138 VGAAAGAMPPVVGWLAVGGHPASPMLVVVYTLYLLWQIPHFWLHAARDREAYRKARLPLP 197
           VG+ +GA+PPVVG+ AV G      L+++  ++ LWQ+PH +  A    + Y  A +P+ 
Sbjct: 149 VGSLSGAVPPVVGYCAVTGRMDGAALILL-AMFSLWQMPHSYAIAIFRFKDYEAANIPVL 207

Query: 198 LLSLPHERYARLLKVWFHAYAVAVLMVPAFPLLEWVGMRIMVTLC 242
            ++   E+ A+L  V++   A+  L+    PL  + G+  M   C
Sbjct: 208 PVAQGVEK-AKLHIVFY--IALFALVSTLLPLAGYTGVGFMAVSC 249