Pairwise Alignments

Query, 208 a.a., nuclease domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 265 a.a., Micrococcal nuclease (thermonuclease) homologs from Pseudomonas stutzeri RCH2

 Score = 48.9 bits (115), Expect = 8e-11
 Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 11/140 (7%)

Query: 12  VVSGATFLDGDTFVYNRASKVRLAGIDTPEIGHDGAPDQYYA-EASRKIAAEIAGKATLV 70
           +V  A  +DGDT        VRL GI+TPE+G +G   + YA  A R++ A +      V
Sbjct: 39  LVDVARVIDGDTLRLGDGRSVRLIGINTPELGREGRKAEPYAVAAQRRLQALVKASDGRV 98

Query: 71  LVPVGAGK-DRHGRGLCDVRLPDGRSLNEVLVEKGSAYVYYHDDVPQALQARLLAAQRRA 129
            + VG  + DR+GR L      +G +L   L+ +G   +     V  A    L+A  +RA
Sbjct: 99  GLVVGRERQDRYGRILAHAYDANGINLEASLLAEGLGLM-----VAIAPNTALVACHQRA 153

Query: 130 MD----ARAGFWKVVLESFP 145
                  R G W+ +    P
Sbjct: 154 EQHGRYERLGVWRKLTPRSP 173