Pairwise Alignments

Query, 208 a.a., nuclease domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 256 a.a., nuclease (RefSeq) from Shewanella loihica PV-4

 Score = 48.1 bits (113), Expect = 1e-10
 Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 21/146 (14%)

Query: 2   LCAQVEAQNLVVSGATFLDGDTFVYNRASKVRLAGIDTPEIGHDGAPDQYYAEASRKIAA 61
           LCA        V+ A+ +DGDT +     ++RL GID+PEI      D++Y E S   A 
Sbjct: 22  LCAPTHYDE-TVTFASVIDGDTLMLEDGRQLRLIGIDSPEI------DRHYPELSEPFAN 74

Query: 62  EIAGKATLVLVPVGAGK--------DRHGRGLCDVRLPDGRSLNEVLVEKG--SAYVYYH 111
                    L+P    K        D  G+ L      +G  L E+++ +G   A VY +
Sbjct: 75  RARNFLASRLLPGQKLKLAFDRKRLDPKGKTLAYAYTQEGEHLQEIMLSQGYAKARVYQN 134

Query: 112 DDVPQALQARLLAAQRRAMDARAGFW 137
           D   Q     L+  +R+A   R G W
Sbjct: 135 DYFWQC----LVNIERQARQERRGLW 156