Pairwise Alignments

Query, 481 a.a., cation efflux family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 297 a.a., Cobalt-zinc-cadmium resistance protein from Pseudomonas fluorescens FW300-N2E2

 Score =  120 bits (302), Expect = 5e-32
 Identities = 85/301 (28%), Positives = 150/301 (49%), Gaps = 14/301 (4%)

Query: 6   TYIAEADREKRIAALSSVGAALLLTGLKLGVGFATNSLGILSEAAHSGLDLVAAVVTYWA 65
           T   E  R  R+A  +SV  AL+L   K    + + S+ +L+    S LD V +++   A
Sbjct: 2   TTSTEHARLLRLATRASVAVALILVVAKALAWWLSGSVSMLAGLTDSALDGVTSLLNLLA 61

Query: 66  VRAASRPADADHPYGHGKVENLSALVETLLLLLTCGWIVREAVDRLFFEAVHVEPSVWGL 125
           V  A RPAD DH YGHGK E+L+ + + L +  +   I  +A +RL    V V+     +
Sbjct: 62  VHYALRPADDDHRYGHGKAESLAGMAQALFIGGSALLIALQAFERL-KNPVPVDAPWLSV 120

Query: 126 AVMGVSIVVDISRARMLRRVARKHNSQALEADALHFSTDVWSSAVVIAGLLALRAAMFFP 185
            V+  S+ + ++   +  RV R   S A+ AD+LH+ +D+  +  ++  L+      +  
Sbjct: 121 GVIVFSLGLTLALLALQHRVIRATGSNAVRADSLHYRSDLLLNGSILVALVLAGFGWY-- 178

Query: 186 QDSFMFAVLQRADAFAALVVSCIVVFVSLQLGRRAVDVLLDGGAQEQV-ERAADALKDLP 244
                     + DA+  L ++  +++ ++Q+ R +  VL+D      V +   +    +P
Sbjct: 179 ----------QLDAWFGLGIAIYILWSAVQIARESFAVLMDQELPPDVSQHMLELACAVP 228

Query: 245 GIVRIERLRVRQSGPRTFVDLLLCVPQGMSFEASHTLSEQAERRLQAVLPQADVIVHMEP 304
           G+V    LR R SG   FV L L +P  ++   +H +S+QA   +    P+A+V+VH +P
Sbjct: 229 GVVGAHDLRTRISGNHWFVQLHLELPGELTLSVAHGISDQAADAIHRAYPKAEVLVHADP 288

Query: 305 A 305
           +
Sbjct: 289 S 289



 Score = 30.8 bits (68), Expect = 6e-05
 Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 300 VHMEPASPDEVG--MLE---RIRGVAASHGLAVHAVSFMLVDGEQHVDLHAEVAGEERLE 354
           V M+   P +V   MLE    + GV  +H L        +      V LH E+ GE  L 
Sbjct: 206 VLMDQELPPDVSQHMLELACAVPGVVGAHDLRTR-----ISGNHWFVQLHLELPGELTLS 260

Query: 355 VAHERVSAFEADLARTLGKATVVTHIEPVAV 385
           VAH         + R   KA V+ H +P  V
Sbjct: 261 VAHGISDQAADAIHRAYPKAEVLVHADPSEV 291



 Score = 27.3 bits (59), Expect = 7e-04
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 411 AEPDVDDCHNMRLHRLGDELSLSFHCRMSPETPVSVAHEAATRLEKSLRARLGDISRVAI 470
           A P V   H++R    G+   +  H  +  E  +SVAH  + +   ++  R    + V +
Sbjct: 226 AVPGVVGAHDLRTRISGNHWFVQLHLELPGELTLSVAHGISDQAADAIH-RAYPKAEVLV 284

Query: 471 HMEPT 475
           H +P+
Sbjct: 285 HADPS 289