Pairwise Alignments

Query, 481 a.a., cation efflux family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 302 a.a., cation-efflux pump FieF from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (345), Expect = 5e-37
 Identities = 86/291 (29%), Positives = 152/291 (52%), Gaps = 14/291 (4%)

Query: 17  IAALSSVGAALLLTGLKLGVGFATNSLGILSEAAHSGLDLVAAVVTYWAVRAASRPADAD 76
           +AA ++   A LL  +K+   + T S+ +L+    S LD+ A+VV    +R A +PAD +
Sbjct: 12  MAAWTATAVASLLLVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIVLRFALQPADHE 71

Query: 77  HPYGHGKVENLSALVETLLLLLTCGWIVREAVDRLFFEAVHVEPSVWGLAVMGVSIVVDI 136
           H +GHGK E+L+AL + + +  +  +++   VDR FF    +     G+ V  ++I+V  
Sbjct: 72  HAFGHGKAESLAALAQAMFISGSACFLILNGVDR-FFRPHELNAPELGIYVSAIAILVTF 130

Query: 137 SRARMLRRVARKHNSQALEADALHFSTDVWSSAVVIAGLLALRAAMFFPQDSFMFAVLQR 196
                 R V RK  SQA+ AD+LH+ +D+  +A ++  L               +  L +
Sbjct: 131 GLVLFQRYVVRKTGSQAIAADSLHYQSDLLMNAAIMVAL------------GLSWWGLGQ 178

Query: 197 ADAFAALVVSCIVVFVSLQLGRRAVDVLLDGG-AQEQVERAADALKDLPGIVRIERLRVR 255
           ADA  A+ +   ++F + ++   AV  LLD     E++E+       + G++ + +LR R
Sbjct: 179 ADAIFAIGIGLYILFSAFKMVHDAVQTLLDRKLPDEELEQIHAICLSVAGVIGMHQLRTR 238

Query: 256 QSGPRTFVDLLLCVPQGMSFEASHTLSEQAERRLQAVLPQADVIVHMEPAS 306
            SGP  F+ L L +   +S   +H +S++ E +L+     ADV++H +P S
Sbjct: 239 MSGPVRFIQLHLELDDNISLLEAHQISDRVEDKLREHFVGADVLIHQDPHS 289



 Score = 26.9 bits (58), Expect = 0.001
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 405 VHSLLDAEPDVDDCHNMRLHRLGDELSLSFHCRMSPETPVSVAHEAATRLEKSLRARLGD 464
           +H++  +   V   H +R    G    +  H  +     +  AH+ + R+E  LR     
Sbjct: 219 IHAICLSVAGVIGMHQLRTRMSGPVRFIQLHLELDDNISLLEAHQISDRVEDKLREHFVG 278

Query: 465 ISRVAIHMEP 474
            + V IH +P
Sbjct: 279 -ADVLIHQDP 287