Pairwise Alignments

Query, 481 a.a., cation efflux family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 297 a.a., Cation efflux protein from Pseudomonas syringae pv. syringae B728a

 Score =  127 bits (320), Expect = 4e-34
 Identities = 92/300 (30%), Positives = 152/300 (50%), Gaps = 20/300 (6%)

Query: 9   AEADREKRIAALSSVGAALLLTGLKLGVGFATNSLGILSEAAHSGLDLVAAVVTYWAVRA 68
           AE  R  R+A  +S+  A  L   K    + + S+ +L+    S LD  A+ +   AV  
Sbjct: 5   AEHSRLLRLATRASLAVATTLILAKGVAWWLSGSVSLLAGLTDSLLDGAASFLNLLAVHY 64

Query: 69  ASRPADADHPYGHGKVENLSALVETLLLLLTCGWIVREAVDRLFFEAVHVEP---SVWGL 125
           A RPAD DH YGHGK E LS + + L + ++   I  +AV+R+     + EP    + G+
Sbjct: 65  ALRPADDDHRYGHGKAEALSGMAQALFITVSGVLIAVQAVERI----QNPEPLGAPLLGM 120

Query: 126 AVMGVSIVVDISRARMLRRVARKHNSQALEADALHFSTDVWSSAVVIAGLLALRAAMFFP 185
            VM +SI + I+   +  RV +   S A+ AD+LH+ +D+  +A +   L+AL  A F  
Sbjct: 121 VVMVISIALTIALLTLQYRVIKATGSAAIRADSLHYRSDLLLNASI---LVALTLAYF-- 175

Query: 186 QDSFMFAVLQRADAFAALVVSCIVVFVSLQLGRRAVDVLLDGGAQEQVERAADALK-DLP 244
                    Q+ DA+  L ++  +++ + Q+ R  + VL+D      V     AL  ++P
Sbjct: 176 -------GWQQLDAYFGLGIALYILWSAFQIARETISVLMDAELPADVSTQMLALACEVP 228

Query: 245 GIVRIERLRVRQSGPRTFVDLLLCVPQGMSFEASHTLSEQAERRLQAVLPQADVIVHMEP 304
           G++    LR R SG   FV L L +P  ++   +H + +Q    +    P+A+V+VH +P
Sbjct: 229 GVLGAHDLRTRISGNHWFVQLHLELPGSLTLSVAHAICDQVADAIHKQFPKAEVLVHADP 288



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 18/65 (27%), Positives = 26/65 (40%)

Query: 325 LAVHAVSFMLVDGEQHVDLHAEVAGEERLEVAHERVSAFEADLARTLGKATVVTHIEPVA 384
           L  H +   +      V LH E+ G   L VAH         + +   KA V+ H +P  
Sbjct: 231 LGAHDLRTRISGNHWFVQLHLELPGSLTLSVAHAICDQVADAIHKQFPKAEVLVHADPQE 290

Query: 385 VREDA 389
           V + A
Sbjct: 291 VVKQA 295



 Score = 24.6 bits (52), Expect = 0.005
 Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 413 PDVDDCHNMRLHRLGDELSLSFHCRMSPETPVSVAHEAATRLEKSLRARLGDISRVAIHM 472
           P V   H++R    G+   +  H  +     +SVAH    ++  ++  +    + V +H 
Sbjct: 228 PGVLGAHDLRTRISGNHWFVQLHLELPGSLTLSVAHAICDQVADAIHKQFPK-AEVLVHA 286

Query: 473 EP 474
           +P
Sbjct: 287 DP 288