Pairwise Alignments

Query, 481 a.a., cation efflux family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 299 a.a., putative cation efflux pump from Phaeobacter inhibens DSM 17395

 Score =  131 bits (330), Expect = 3e-35
 Identities = 91/291 (31%), Positives = 150/291 (51%), Gaps = 20/291 (6%)

Query: 19  ALSSVGAALLLTGLKLGVGFATNSLGILSEAAHSGLDLVAAVVTYWAVRAASRPADADHP 78
           A +S+  ALL+   K    + T S+ + S+A  S +++  A++ ++AVR ASRPADA HP
Sbjct: 11  ATTSIAVALLVLCAKALAWWLTGSIALFSDAMESLVNIGGAIIAWFAVRYASRPADAGHP 70

Query: 79  YGHGKVENLSALVETLLLLLTCGWIVREAVDRLFFEAVHVEPSVW---GLAVMGVSIVVD 135
           +GH K E  SA+VE +++++    I++EA+  L        P VW   GL V   ++V++
Sbjct: 71  FGHHKAEYFSAVVEGIMIIVAALLILQEAISALLVPT----PLVWSAAGLWVNAGAMVIN 126

Query: 136 ISRARMLRRVARKHNSQALEADALHFSTDVWSSAVVIAGLLALRAAMFFPQDSFMFAVLQ 195
           +  AR+L        S AL A   H  +DVW+SA V+ GL+             M     
Sbjct: 127 LLWARVLIARGAALKSPALAAGGRHLMSDVWTSAGVLIGLVLA-----------MGTGWS 175

Query: 196 RADAFAALVVSCIVVFVSLQLGRRAVDVLLDGGA--QEQVERAADALKDLPGIVRIERLR 253
             D   AL+V+  ++     +   +V  L+D  A   E+ E AA   +   G +++  L+
Sbjct: 176 LLDPVLALLVAVNILREGYLVVASSVGGLMDQAAPQNERDEIAAIIHRTAQGALQVHGLK 235

Query: 254 VRQSGPRTFVDLLLCVPQGMSFEASHTLSEQAERRLQAVLPQADVIVHMEP 304
            R++G   FV+  + V   M+  ASH + ++ E  ++  LP A V +H+EP
Sbjct: 236 TRRAGQAVFVEFHMVVAGDMTVRASHAICDRIEEAIRVALPTAQVTIHVEP 286



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 21/88 (23%), Positives = 42/88 (47%), Gaps = 7/88 (7%)

Query: 387 EDALPEASNEALTAVEGVVHSLLDAEPDVDDCHNMRLHRLGDELSLSFHCRMSPETPVSV 446
           + A P+   + + A+   +H        V   H ++  R G  + + FH  ++ +  V  
Sbjct: 206 DQAAPQNERDEIAAI---IHRTAQGALQV---HGLKTRRAGQAVFVEFHMVVAGDMTVRA 259

Query: 447 AHEAATRLEKSLRARLGDISRVAIHMEP 474
           +H    R+E+++R  L   ++V IH+EP
Sbjct: 260 SHAICDRIEEAIRVAL-PTAQVTIHVEP 286



 Score = 31.6 bits (70), Expect = 4e-05
 Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 1/89 (1%)

Query: 302 MEPASP-DEVGMLERIRGVAASHGLAVHAVSFMLVDGEQHVDLHAEVAGEERLEVAHERV 360
           M+ A+P +E   +  I    A   L VH +          V+ H  VAG+  +  +H   
Sbjct: 205 MDQAAPQNERDEIAAIIHRTAQGALQVHGLKTRRAGQAVFVEFHMVVAGDMTVRASHAIC 264

Query: 361 SAFEADLARTLGKATVVTHIEPVAVREDA 389
              E  +   L  A V  H+EP    ED+
Sbjct: 265 DRIEEAIRVALPTAQVTIHVEPEHKLEDS 293