Pairwise Alignments

Query, 421 a.a., periplasmic [Fe] hydrogenase, large subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 339 a.a., Electron transport complex protein RnfB from Pseudomonas fluorescens FW300-N2E2

 Score = 47.0 bits (110), Expect = 9e-10
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 22  PDKLHFVQIDEAKCIGCDTCSQYCPTAAIFGEMGEPHSIPHIEACINCGQCLTHCPENAI 81
           P ++ F++  EA+CIGC  C Q CP  AI G     H++  I+ C  C  C+  CP + I
Sbjct: 70  PAQIAFIR--EAECIGCTKCIQACPVDAIVGAAKLMHTV-LIDECTGCDLCVAPCPVDCI 126



 Score = 25.4 bits (54), Expect = 0.003
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 66  CINCGQCLTHCPENAIYEAQSWVPEVEKKLKDGKVKCIAMPAP 108
           CI C +C+  CP +AI  A   +  V      G   C+A P P
Sbjct: 81  CIGCTKCIQACPVDAIVGAAKLMHTVLIDECTGCDLCVA-PCP 122