Pairwise Alignments

Query, 410 a.a., GTP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 453 a.a., tRNA modification GTPase TrmE (RefSeq) from Shewanella loihica PV-4

 Score = 54.3 bits (129), Expect = 7e-12
 Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 21/164 (12%)

Query: 10  LHIGIYGRRNVGKSSLLNALTRQTVSIVSATPGTTTDPVEKTMEMAPIGPVVFIDTAGID 69
           + + I GR N GKSSLLNAL  +  +IV+   GTT D + + + +  + P+  IDTAG+ 
Sbjct: 216 MKVVIAGRPNAGKSSLLNALAGKESAIVTEIAGTTRDVLREHIHLDGM-PLHIIDTAGLR 274

Query: 70  DTGD----LGLMR-------SDRTRQMFDRTDLALVASEGDVWGDYERDLVAAFRERKIP 118
           DT D    +G+ R       +D+   M D T    V    D+W D+   L      + + 
Sbjct: 275 DTTDTVEQIGIERAWAEIETADQVLFMVDGTTTDAV-DPHDIWPDFIDRL-----PKNLG 328

Query: 119 VIAVLTKGDETPVAQTVRQSLLAEGIESAAVCSTDGRGIDALRA 162
           V  V  K D T  +         +G +   + +  G G+D L+A
Sbjct: 329 VTVVRNKADLTGESLDATDE---QGHKVFRLSAKTGSGVDELKA 369