Pairwise Alignments

Query, 294 a.a., site-specific recombinase, phage integrase family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 323 a.a., Tyrosine recombinase XerD from Xanthomonas campestris pv. campestris strain 8004

 Score =  225 bits (573), Expect = 1e-63
 Identities = 131/296 (44%), Positives = 178/296 (60%), Gaps = 9/296 (3%)

Query: 1   MDRWLEHLLVERGLAENTLAAYSADLIELQVFLEERGCLLAEVDEQTLFMHVVDLRRRGM 60
           + R+L+ L  E+G+A  TL +Y  DL  L  + +  G  L   D   LF ++        
Sbjct: 27  IQRFLDRLWAEQGVARQTLDSYRRDLEGLARWRDGAGGGLQGADRSALFDYLRWRTEARY 86

Query: 61  AGRTLARHLATLRGFFAFAVGEGELEADPALFLENPKLARNLPDVLTRDEMATILARPDL 120
           A R+ AR L+TLRGF+A  + +G    DP   L+ P+L R+LP  LT  ++  +LA P++
Sbjct: 87  APRSNARLLSTLRGFYALCLRDGVRSDDPTALLDPPRLPRSLPKALTESQIDALLAAPEI 146

Query: 121 SDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVRVFGKGAKERIVPVHHVSCA 180
              LG RDR MLELMYAAGLRVSEL  L  +  + + GV+RV GKG+KER+VP+   S  
Sbjct: 147 GTPLGLRDRAMLELMYAAGLRVSELVTLPAVAINLRQGVLRVTGKGSKERLVPLGEESQH 206

Query: 181 LVTAYLRDWRPAFS--PVEPA------MFLNRSGKGLSRQAVWKVVKRHVAEAGIHKD-I 231
            +  YL   RP  S     PA      +F++ + + LSRQ  W +VKR+ A AGI  D +
Sbjct: 207 WLERYLETARPTLSERKAVPAVDGQVPLFIDAARRPLSRQQFWGLVKRYAAVAGIDPDTV 266

Query: 232 SPHTFRHSFATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRLRRIHNAHHPR 287
           SPH  RHSFATHLL  GADLR++Q+LLGH+ +S T+IYT V    L+ +H  HHPR
Sbjct: 267 SPHGLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVARQHLQTLHARHHPR 322