Pairwise Alignments

Query, 294 a.a., site-specific recombinase, phage integrase family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 301 a.a., site-specific tyrosine recombinase XerD from Parabacteroides merdae CL09T00C40

 Score =  212 bits (540), Expect = 7e-60
 Identities = 119/291 (40%), Positives = 178/291 (61%), Gaps = 2/291 (0%)

Query: 1   MDRWLEHLLVERGLAENTLAAYSADLIELQVFLEERGCLLAEVDEQTLFMHVVDLRRRGM 60
           ++R+  +L +E+ L+ N++ AY  DL +L  F+E  G   A+V    L   V  L   G+
Sbjct: 8   IERYKTYLRLEKALSANSIDAYLTDLDKLTNFVESEGKKYADVTYDDLQQFVARLHDIGI 67

Query: 61  AGRTLARHLATLRGFFAFAVGEGELEADPALFLENPKLARNLPDVLTRDEMATILARPDL 120
             R+ AR ++ ++ F+ F   +  +  DP   LE+PK+   LP+VLT +E+ +IL   DL
Sbjct: 68  HPRSQARIISGIKSFYRFLFLDDYITTDPTELLESPKIGLKLPEVLTVNEINSILDTIDL 127

Query: 121 SDRLGFRDRTMLELMYAAGLRVSELCALRPLDFDAQAGVVRVFGKGAKERIVPVHHVSCA 180
           +   G R+R MLE++Y+ GLRVSEL +LR  D     G ++V GKG+K+R+VP+   +  
Sbjct: 128 TLPEGQRNRAMLEVLYSCGLRVSELVSLRFTDVYFDEGFIKVEGKGSKQRLVPISETAIK 187

Query: 181 LVTAYL--RDWRPAFSPVEPAMFLNRSGKGLSRQAVWKVVKRHVAEAGIHKDISPHTFRH 238
            +  YL  R+        E  +FL+R G  LSR  V+ ++K+    AGI K++SPHTFRH
Sbjct: 188 EIKNYLYDRNHVAVKKGFEDILFLSRRGTALSRIMVFHIIKQQTEMAGIKKNVSPHTFRH 247

Query: 239 SFATHLLEGGADLRSVQLLLGHADISATEIYTHVQADRLRRIHNAHHPRTR 289
           SFATHLLEGGA+L ++Q +LGH  I+ TEIYTH+    LR+    HHPR++
Sbjct: 248 SFATHLLEGGANLLAIQEMLGHEKITTTEIYTHIDRQFLRKEILEHHPRSK 298