Pairwise Alignments

Query, 905 a.a., DNA mismatch repair protein MutS (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 907 a.a., DNA mismatch repair protein MutS from Rhodopseudomonas palustris CGA009

 Score =  556 bits (1433), Expect = e-162
 Identities = 357/902 (39%), Positives = 500/902 (55%), Gaps = 51/902 (5%)

Query: 7   KLTPMFEQYLRIKEDYPDALLFYRMGDFYELFFDDAETTARELQIALTCRNPNAELKAPM 66
           K++PM EQY  IK   P  LLFYRMGDFYELFF+DAE  +R L I LT R  +     PM
Sbjct: 22  KMSPMMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIASRALGITLTKRGKHLGADIPM 81

Query: 67  CGVPYHAVEGYISQLLDKGYRVAICEQIEDPKEA---KGLVKRAVTRVLTPGTVIDDANL 123
           CGVP    + Y+ +L+  G+RVA+CEQ EDP  A   K +V+R V R++TPGT+ +D  L
Sbjct: 82  CGVPVERSDDYLHRLIALGHRVAVCEQTEDPAAARARKSVVRRDVVRLITPGTLTEDTLL 141

Query: 124 DAKEHNYLGALFWNQDAEAGA----FAWVDVSTGEWSGLYSRKLAELWQWAQKMAPRELL 179
           DA+ +NYL A+       AGA     AW+D+STGE+  +     AEL     ++ P E +
Sbjct: 142 DARANNYLLAIA-RARGSAGADRIGLAWIDISTGEFC-VTECSTAELAATLARINPNEAI 199

Query: 180 LPEGV--DTPAMATLGTTQTVRVPARSHFDLKSGTERVMRAQGVADLGSLGLEGKPELVR 237
           +P+ +  DT    TL     V    R  FD  +   R+     VA +  L    + E   
Sbjct: 200 VPDALYSDTELAPTLRELAAVTPLTRDVFDSATAERRLCDYFAVATMDGLAALSRLEAT- 258

Query: 238 ACAALLAYLAQTQKQELSHLAPFKPLNLGRHLIIDEVTERNLELFHRLDGRKGPGTLWHI 297
           A AA + Y+ +TQ  +   L+P      G  + ID  T  NLEL   L G +  G+L   
Sbjct: 259 AAAACVTYVDRTQLGKRPPLSPPAREATGSTMAIDPATRANLELTRTLAGERR-GSLLDA 317

Query: 298 LDRTLTPMGGRLLEERMHHPWREASPIRETQQVVEWLFQDDVRREALRTALDLVYDLERL 357
           +D T+T  G RLL +R+  P  +A+ I      VE    D   RE +R++L    D+ R 
Sbjct: 318 IDCTVTAAGSRLLAQRLAAPLTDAATIARRLDAVEAFAVDSGLREQIRSSLRAAPDMARA 377

Query: 358 STRIFLNRATPKDFIALRQSLSALPAVRATLERPANPEGTYPTDAETSGDTLPKPLSDML 417
             R+ L R  P+D   LR  + A   V   L + A+P    P +  ++   L +P  ++ 
Sbjct: 378 LARLSLGRGGPRDLANLRDGIRAADEVLVQLAQLASP----PQEIASAMAALQRPSRELC 433

Query: 418 SAWDDLADYADLLRRALTDNPPHLVTEGGLFRPGFDPDLDELLDLAEHGEARLQELLAEE 477
           +           L RAL D+ P L  +GG  R G++P LDE   L +     +  + A  
Sbjct: 434 AE----------LGRALADDLPLLKRDGGFVREGYEPALDETRKLRDASRLVVASMQARY 483

Query: 478 QTVSGLPKLKLGYNRVFGYFFELS-----RAGADSVPEHFVRRQTLANAERFTTERLKEL 532
              +G+  LK+ +N V GYF E+S     +  A  +   F+ RQTLA   RFTT  L E+
Sbjct: 484 ADDTGIKALKIRHNNVLGYFVEVSAQHGEKLMAPPLNATFIHRQTLAGQVRFTTAELGEI 543

Query: 533 EEKLVSATDRRKTLEYRLFQSLRDTVAEARPRVLFMADMLAHLDFWQSLADVARRNGWVR 592
           E K+ +A DR   LE  +F  L  ++  A   +   A   A LD   +LA +A  + +VR
Sbjct: 544 EAKIANAGDRALGLELEIFDRLAGSIDAAGDDLRAAAHAFALLDVATALAKLASDDNYVR 603

Query: 593 PDVHTGHDIVIREGRHPVVEAMQGSAS--FVPNDLRMD-----EKRRLLLITGPNMAGKS 645
           P+V       I  GRHPVVE     A   F+ N   +      +  ++ L+TGPNMAGKS
Sbjct: 604 PEVDESLAFAIEGGRHPVVEQALKRAGEPFIANACDLSPGPAQKNGQIWLLTGPNMAGKS 663

Query: 646 TVLRQTAIICLLAQMGAFVPAREASIGIADRIFSRVGASDNLAQGQSTFMVEMMETARIL 705
           T LRQ A+I LLAQ+G+FVPA  A IGI DR+FSRVGA+D+LA+G+STFMVEM+ETA IL
Sbjct: 664 TFLRQNALIALLAQVGSFVPAIRARIGIVDRLFSRVGAADDLARGRSTFMVEMVETAAIL 723

Query: 706 RQASKRSLVILDEIGRGTSTFDGMALAWAVVEELTRRAGGGIRTLFATHYHEITSLEGRI 765
            QAS+R+LVILDEIGRGT+TFDG+++AWA +E L  +     R+LFATHYHE+T+L  ++
Sbjct: 724 NQASERALVILDEIGRGTATFDGLSIAWAAIEHLHEQ--NRCRSLFATHYHELTALSAKL 781

Query: 766 PGVHNMNIAIREWNGDIVFLRRLVPGPADKSYGIEVARLAGVPHSVVQRARELLADLERT 825
           P + N  + ++EW G++VFL  ++PG AD+SYGI+VA+LAG+P SVV RA+ +LA LE  
Sbjct: 782 PRLFNATVRVKEWRGEVVFLHEVLPGSADRSYGIQVAKLAGLPPSVVSRAKAVLAKLE-- 839

Query: 826 RDAARGTNSAPSRQTLPGLDLPSKQEQVDTIVAPPPCSGVEHPLLVALRDIDTDDMTPLE 885
                  +    +  +  L L +   +     APP        L+ A++ +  D+MTP E
Sbjct: 840 -----ANDRGQPKTLIDDLPLFAITARAPAEAAPP---SEAEQLIDAVKALHPDEMTPRE 891

Query: 886 AL 887
           AL
Sbjct: 892 AL 893